Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral652g00003 ATGGCAACATGTTGTCCAAGTTGCTCCAAGTTCACACCAAGTTCTTTTCTTCCACACTCTTCTCTCTTACCTTCTCTCTTCAGTGTTCCTTCTAGTTCTGTGAGGCCTGTTAGTCTCCGTTGTTTCTATAATCGTCAAAGACTTTGGCTTCGATCAAGCCGTCGTTGTGGTCCTCTACGAGCTACGTCGTGCAGTAATATTGAGTCTGGAGAACTGCCAGAAGCTCAGAATGCTCTTTCAAAACTTCTTCAAGAATTTGGGATTTCTGAGGAGGAATCTAATTCTATTGCGTCTAATTCACCAAAGTATTTGAGTATGTTGGTTGATGAAGTTTGGGAAAGGGACGAACTTTCAATGTGGGAGAAGCAAATTGATGGGTTCCAGGATAAAGTGGTTCACATTGCCAGGGAGAAAGGTGATAATGGCAAAGTTGCATACTTGGAGAGTCTCGGTTTGAGCCTCTCTTCAGCTATGAATGTGGCCAGATATCTTTCTGCAGAAACACTTACAACACTCATTCTTAAGGTCAAGTGTATGAAGGAACTGTTCTTTTCTGGCAGTGAAAGTTATGAATTCCCGACCAGAAGAGTTCGCAATATGATGATGCAGATATCAATTCCTATTGATGAAGATCTGCAGCAGACTTTGTCCTTTTTTGAGAAGGTTGAAGCAAGGCGAGGAGGTTTAAATATGTTGAATTCCAGCGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCCGTCTACTTTTGTTATCTGTAAAATTTCACATGAAACCATTAGCGGCGTTTCTTGAGAGTGTTGGAATCCAAAGAGGTCTCATCAGAAATATACTGTTGACTTTTCCTCCCTCTTTGCTATGGAACATTGAAGTATTTAAAACTCGAGTACTAGCCTTGAAAGAGATTGGGCGTGTAAATGACAATTATGCTAAGTTGCTGTTAAAATATCCATGGATACTGTCTAAAAGCATTCAAGACAATTATCAAGAGGTTGTCTCTTTGTTTGATTCAGAGAAGGTTCCGAAGGCATTCGTGGATCGTGCAATCAAAAGCTGGCCCCATATATTGGGCTGTTCACCGAGCAAGCTAAAACTGATGGTTGATCGGTTTCGTGAACTAGGAGTTCAACACAAGAAGTTGGGTAAAGTCATTGCTAAAAGTCCTCAGCTACTGCTACAGAAGCCGCAAGACTTTGTCAAGGTTGTTCTGTTCTTTGAAAATATGGGGTTTGATAGACAAACAATCGGGACAATATTGGCTCGCTGTCCTGAAATCTTTGCTGCCTGCCCTATCAAAACTCTCAAGAGAAAGGTTGAGTTCCTACATGGTATTGGTGTTTCTGAAGCTCACCTTCCACGGGTTATAAAAAAGTATCCAGAGCTTCTTGTGTCTGACCCCGACAGAACTATGCTACCCAGGTTGATGTACTTGATGAAATTAGGACTATCTGAAAGAGACGTTGCATTCATGGTACGATCATTTTCTCCTCTGCTTGGATACAGCATTGAAGAGGTTTTGAGACCCAAAGTAGAATTCCTGGTGAACACCATGGAGAGGCCAGTGAGGGACGTGGTGGGGTACCCCAGGTACTTTAGCTATTCTCTAGAGAAGAAGATAAAACCAAGATATTGGGTGCTTAAAGGAAGGGATATTGAGTGTAGTTTGAAGGATATGCTCTCGAAAAATGACGAAGAATTTGCTGCTGAATATATGAATCTTCCATTAACTCATTCCTGA 1740 0.4132 MATCCPSCSKFTPSSFLPHSSLLPSLFSVPSSSVRPVSLRCFYNRQRLWLRSSRRCGPLRATSCSNIESGELPEAQNALSKLLQEFGISEEESNSIASNSPKYLSMLVDEVWERDELSMWEKQIDGFQDKVVHIAREKGDNGKVAYLESLGLSLSSAMNVARYLSAETLTTLILKVKCMKELFFSGSESYEFPTRRVRNMMMQISIPIDEDLQQTLSFFEKVEARRGGLNMLNSSDAAFDFLIESFPRLLLLSVKFHMKPLAAFLESVGIQRGLIRNILLTFPPSLLWNIEVFKTRVLALKEIGRVNDNYAKLLLKYPWILSKSIQDNYQEVVSLFDSEKVPKAFVDRAIKSWPHILGCSPSKLKLMVDRFRELGVQHKKLGKVIAKSPQLLLQKPQDFVKVVLFFENMGFDRQTIGTILARCPEIFAACPIKTLKRKVEFLHGIGVSEAHLPRVIKKYPELLVSDPDRTMLPRLMYLMKLGLSERDVAFMVRSFSPLLGYSIEEVLRPKVEFLVNTMERPVRDVVGYPRYFSYSLEKKIKPRYWVLKGRDIECSLKDMLSKNDEEFAAEYMNLPLTHS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral652g00003 579 Gene3D Transcription termination factor 3, mitochondrial 371 578 IPR038538 -
Pral652g00003 579 PANTHER CGI-12 PROTEIN-RELATED 144 376 IPR003690 GO:0003690|GO:0006355
Pral652g00003 579 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Pral652g00003 579 SMART mt_12 522 553 IPR003690 GO:0003690|GO:0006355
Pral652g00003 579 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Pral652g00003 579 SMART mt_12 276 306 IPR003690 GO:0003690|GO:0006355
Pral652g00003 579 SMART mt_12 382 412 IPR003690 GO:0003690|GO:0006355
Pral652g00003 579 SMART mt_12 489 521 IPR003690 GO:0003690|GO:0006355
Pral652g00003 579 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Pral652g00003 579 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Pral652g00003 579 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Pral652g00003 579 FunFam Mitochondrial transcription termination factor family protein 362 575 - -
Pral652g00003 579 Pfam mTERF 264 568 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral652g00003 Pral-Chr652 11820 17751 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral652g00003 mTERF 1e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral652g00003 K15031 - qsa:O6P43_022473 680.248