Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral649g00030 ATGAGCTCTAATAACTTGCAGAAACTCAAATATGATAATAAACACAAAGATGAAGAAGAAGCAGAAGATAACGTACTGTTTCATCAAAGCGAGACAATTCCGTTGTCATCGCCGCCGCCATATGGGTTCTCGGAGCCGCCGTGGCCCTCCCATTTTGTGGAGGAGGACAACAACGAGGAAGAAGTTGTGTATGCAGATAAGGTGAAAGTGCAGATATTTGACTTGGAGACTTCCTCTAACTCCACCTCCACCGTGGCTGTGCCGCCATTCTCGTGGCGCAAGCTGTGGCTGTTCACGGGGCCGGGGCTGCTGATGAGCGTGGCGTTTTTGGACCCTGGGAATTTGGAGGGTGATTTGCAGGCAGGAGCCATTGGAGGGTACTCATTGTTGTGGCTTTTGATGTGGACCACCGTCATGGGGCTGCTGATACAACTGTTGTCGGCGAGGCTCGGGGTGGCGAGCGGGAGGCACTTGGCGGAGCTCTGCCGGGAAGAGTACACAAGGTGGGCGAGGTTGGTACTGTATGTTATTGGTAGTGCCATAGCCATCAAGATTTTAAGTCATGGCGTTTTCCCTATTTGGGCAGGAGTCGTAATTACAGCCCTGGATAGCTTTGTGTTCCTGTTTCTTGAGAACTATGGAGTAAGAAAGCTGGAAGGTGTTTTCGCAATTTTCGTAGGGACCATGGCCCTTTCGTTTGCTTGGATGTTCTTCGATACAAAGCCTAGTCCTAAACAACTTCTTATAGGTATTTTAGTCCCAAAAGTGAGCTCAAAAACGCTTCGTCAAGCTGTGGAACTTATAGGCTGTGTTATAACTCCACACAACGTATTTCTCCACTCAGCCCTAGTTCAATCCAGAAACATAGACATAAAAAACAATGGCCAAGTCCAAGAGGCTCTAAACTACTACACAATCGAATCCACACTTGCACTTATCATCACCTTCTTCATCAACCTCTCGGTCATGACGGTCTTTGCTAGGGTTTTCTACGACACAGAACAAGCCGACACCATCGGACTCGTAAACGCCGGCCAGTATCTGCAAGAGAAATATGGCGGAGGGTTCTTCCCCATACTGTATATTTGGGGAATAGGGTTGTTGGCTGCAGGACAAAGCAGTACTATTACCGGTACGTATGCTGGACAGTTTATTACAGAAGGGTTTCTGAAACTGCGTTTAAAGAAATGGTTAAGGGCTCTGATCACTAGAAGTCTGGCCATTGTTCCTACCATGATTGTTGCTGTTGTGTTTAATACTTCTGAAGGGTCTTTGGACACTTTGAATGAGTGGCTCAATGTGGTTCAGTCCATTCAGATTCCTTTTGCTCTCATCCCTCTTCTTACTTTGGTGTCTAAAGAGGAGGTCATGGGCCCATTCAGAATTGGACCCGTCGTGGAGAAAGTGGCATGGACAGTGGCAGTGCTGGTAATTCTGGTATATGGATACATGTTGCTGGACTTCTTCCTATCAGAAGTGAAGGGAATTGTGTATGGTTTTGTGGTGTTCCTTTGTGCGGCTGCTTGGTTATCATTCATAGCTTATTTGGTCAAACACAGTGGTGCCTTTTCTTCTTTCCTCCACACTTCTCCTCATTTTCGTGGCTTCTCCTCTCTTTCTGCCCATTAA 1629 0.4696 MSSNNLQKLKYDNKHKDEEEAEDNVLFHQSETIPLSSPPPYGFSEPPWPSHFVEEDNNEEEVVYADKVKVQIFDLETSSNSTSTVAVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIGGYSLLWLLMWTTVMGLLIQLLSARLGVASGRHLAELCREEYTRWARLVLYVIGSAIAIKILSHGVFPIWAGVVITALDSFVFLFLENYGVRKLEGVFAIFVGTMALSFAWMFFDTKPSPKQLLIGILVPKVSSKTLRQAVELIGCVITPHNVFLHSALVQSRNIDIKNNGQVQEALNYYTIESTLALIITFFINLSVMTVFARVFYDTEQADTIGLVNAGQYLQEKYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLRLKKWLRALITRSLAIVPTMIVAVVFNTSEGSLDTLNEWLNVVQSIQIPFALIPLLTLVSKEEVMGPFRIGPVVEKVAWTVAVLVILVYGYMLLDFFLSEVKGIVYGFVVFLCAAAWLSFIAYLVKHSGAFSSFLHTSPHFRGFSSLSAH 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral649g00030 542 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 93 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 81 518 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 Hamap Divalent metal cation transporter MntH [mntH]. 82 489 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 MobiDBLite consensus disorder prediction 9 26 - -
Pral649g00030 542 PRINTS Natural resistance-associated macrophage protein signature 399 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 PRINTS Natural resistance-associated macrophage protein signature 215 236 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 PRINTS Natural resistance-associated macrophage protein signature 264 287 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 PRINTS Natural resistance-associated macrophage protein signature 371 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 PRINTS Natural resistance-associated macrophage protein signature 160 186 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 PRINTS Natural resistance-associated macrophage protein signature 433 452 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 PRINTS Natural resistance-associated macrophage protein signature 190 209 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 MobiDBLite consensus disorder prediction 1 41 - -
Pral649g00030 542 Pfam Natural resistance-associated macrophage protein 116 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral649g00030 542 NCBIfam Nramp family divalent metal transporter 100 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral649g00030 Pral-Chr649 897644 900806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral649g00030 57 520 Inorganic Solute Cotransporters AT1G47240 69.665 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral649g00030 K21398 - gmx:100801411 793.882