Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral645g00002 ATGAAGGAAGGTGGTAGAAAACATGGCGCAATGTCGCCATGTGCCGCGTGCAAGCTTCTCCGGAGGAGATGTGCTCAGGACTGCCTCTTTGCTCCTTACTTTCCTGCGGATGAACCCCACAAATTTGCAAGCGTTCACAAGGTTTTTGGTGCCAGCAATGTCAATAAAATGTTACAGGAACTGCCAGAGGAGCAAAGGAGCGACGCGGTGAGTTCAATGGTATATGAAGCAAATGCGAGGATGAGGGACCCAGTGTATGGATGTGTGGGGGCCATATCGTGTCTTCAGCAACAGGTCGATGTGCTTCAAACACAACTTGCTCTTGCTCAGGCTGAGCTTGTTCACATCAGAAATCACAACCAACCTTCTTCTTCTTCCTCAACCCAACCCCAATCTTCTTCCCATGACGCCAAGTCCTCTCTTTTTGCCGTCGGCAATGTCACCGAGTCGTTATGGTCTTGCTAA 465 0.4968 MKEGGRKHGAMSPCAACKLLRRRCAQDCLFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEEQRSDAVSSMVYEANARMRDPVYGCVGAISCLQQQVDVLQTQLALAQAELVHIRNHNQPSSSSSTQPQSSSHDAKSSLFAVGNVTESLWSC 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral645g00002 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 138 - -
Pral645g00002 154 Coils Coil 92 112 - -
Pral645g00002 154 MobiDBLite consensus disorder prediction 118 138 - -
Pral645g00002 154 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Pral645g00002 154 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral645g00002 Pral-Chr645 20457 23313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral645g00002 1 154 AS2 family AT1G31320 65.116 2.25e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral645g00002 LOB 8.1e-43 No_clan