Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral645g00001 ATGGATCATATGGAAGATTTGGGAAGCACAGAGGAGTTTGAACTTCCAGGGTTTCGATTCCATCCTACAGATGAGGAACTCGTGGGATTCTACCTCAGAAGGAAGCTTGACAAGAAACCCATCTGTATCGAACTCATCAAGCAGATTGATATTTACAAATACGACCCCTGGGATCTTCCGAAAGCCAGTTATGCGGGAGGAGAGAAGGAATGGTACTTCTACTGCAGAAGGGGAAGGAAGTACAAGAACAGTGTGAGGCCGAATAGAGTGACAGGATCAGGGTTCTGGAAAGCAACAGGGATAGACAAGCCTGTCTTTTCTGTTGCAGGAGAAGGCATTGGCCTCAAGAAAACCCTCGTTTACTATCGTGGCAGTGCTGGCAAAGGCACCAAAACTGACTGGATGATGCACGAGTTTCGCCTTCCCTCCAACAATAATGACCCTGCCAATAATAATCCCCAAGAAGCCGAAATTTGGACCCTGTGTAAAATTTTCAAAAGAACCGTGACGCAAAAAAAGTGCACACCAGATTGGAGACACTTGGCCACAGCAAAGCGTCGTTCCACTGACAAGATGAGCAGATCAATGAGCATTAATAACAGTACTGTGGAGTCTTGTAATAGTACTATTACTTGTGATCGAGAATCATATATCAACTTTGGAGGATGCAGCCCAGAGCAGAAGCCTGTTGTTCATAATAACTACAGTACAAGCAATCATTATAATGATCAAAGGAATCATCACGTCAACCATTTCAGCACTTCATTAACGGCGGCTCAGCAGCCTCATCATCAAGTAACTGCGTCGTCATCACCATCATCATCATCTTTGAGCTTCTGGGGAAACCAGAAGGCTTCCAATGACCAGTTTGCTTTTGACAACCCATGGGATGAGCTTCGATCAGTCATGCAGTTTTGCTCTTAA 924 0.4481 MDHMEDLGSTEEFELPGFRFHPTDEELVGFYLRRKLDKKPICIELIKQIDIYKYDPWDLPKASYAGGEKEWYFYCRRGRKYKNSVRPNRVTGSGFWKATGIDKPVFSVAGEGIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNNNDPANNNPQEAEIWTLCKIFKRTVTQKKCTPDWRHLATAKRRSTDKMSRSMSINNSTVESCNSTITCDRESYINFGGCSPEQKPVVHNNYSTSNHYNDQRNHHVNHFSTSLTAAQQPHHQVTASSSPSSSSLSFWGNQKASNDQFAFDNPWDELRSVMQFCS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral645g00001 307 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Pral645g00001 307 MobiDBLite consensus disorder prediction 257 279 - -
Pral645g00001 307 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Pral645g00001 307 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 260 - -
Pral645g00001 307 FunFam NAC domain-containing protein 35 23 170 - -
Pral645g00001 307 Gene3D NAC domain 23 171 IPR036093 GO:0003677|GO:0006355
Pral645g00001 307 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral645g00001 Pral-Chr645 9944 11869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral645g00001 11 176 NAC Transcription Factor Family AT5G39820 57.219 1.85e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral645g00001 NAM 5.6e-35 No_clan