Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral638g00010 ATGGACATCAAAGATACGTACAAGATCTCTAACAAAGATTGGCGAGGAGACCCATGTGTGCCGAAACTTGCTTGGGATGGACTAAACTGCGGTTCCCGTGCCAATGGTAACAAGGCAAGCATCATCTCAGTGAACCTAAGCGCGACCAAATTGGCAGGGCAAATAACTACCTCATTTTTACAACTTACAGAGTTAGAATCCTTAGATTTGTCATTTAATGACTTGTTGGGATCAGTACCTGAATTTTTAGCTGACCTACCAAAATTGAGAATCCTTAACTTGACTGGCAACAAGCTTACAGGTTCCGTTCCCAAGGCTCTTGAGGAAAAGGCAAATTTGCAAATAAGTTTGGAGGATAATCCTGGACTTTGCCTGGTGGATTCATGCAAAAAGCAGAACTTTGTCATTCCACTTGTTGCTTCTGTTTCTGCTTTAGTTGCAAGCCTCTTGGTCTGTCTCAGAATATGGATCTTCAAAACCAAGAAGTTGAAAGTGCATTTCTCTATTTCTACACATGAAGAATCGTTACAACTAAAAACCAAGGCAGTTTCATACTCTGTAATACTTAGAATCACTGATAATTTGAAAAACTTAATTGGAGAAGGAGGATTTGGAAAGGTCTATTATGGCAATCTGGAGAATAACGTTCATGTTGCTGTGAAGTTACTTTCCCAATCATCAATGCAAGGTTTCAGAGAATTTCGATCAGAGGTAGAACTCTTAATGGTTATTCATCATAGACACTTGGTTCGTCTGATTGGATACTGTGAAGAAGGTGCTGTGAGGGCATTAATTTATGAATATATGGCTAATGGCAATCTTCAACAACATTTATCAAAAGAGAACCTTAATGTTTTGAAATGGAATGAGAGGCTTCAAATTGCATTGGATGCTGCACTTGGATTGGATTATTTGCATAATGGTTGCAAGCCACCAGTAGTTCATAGAGACTTAAAGACATCCAACATTTTACTAGATGAAAACATGCAAGCCAAGATTTCTGACTTTGGATTATCTCGAGCTTTTGCAAATGATGTTGATAGTCATGTAACAACTTGTCCTGCTGGCACACCGAGTTATCTTGATCCTGAATTCCAAAGTTCTGGAAACTTGACCAAAAAGAGTGATGTTTATAGCTTTGGAATAATTTTTCTTGAGCTCGTCACAGGTCAACCCGTATTAAGAAGAGAACTTGGCACAGTTCATTACGTTCTTACTTGGGTTACCCCTAAACTTGAAATGGGGGATATCCAATCTATCATAGATCCAAAGTTAGAAGAATACAGCACTAATTCAGCTTGGAAATTATTAGAGATAGCTATGTGTTGCACTACAGCATCTGGAGTTGAAAGGCCTGACATAAGCCATGTAGTAGCTGAACTAAAGGAATGTTTGGCTCTGACCAAAAGTATAGGCTGGAATTCAACCAGTGATCTGGAAACGGCTTCTCTGGGGTCTGATTCAGGGCTTATCCCTTATGCTCGGTAG 1488 0.3945 MDIKDTYKISNKDWRGDPCVPKLAWDGLNCGSRANGNKASIISVNLSATKLAGQITTSFLQLTELESLDLSFNDLLGSVPEFLADLPKLRILNLTGNKLTGSVPKALEEKANLQISLEDNPGLCLVDSCKKQNFVIPLVASVSALVASLLVCLRIWIFKTKKLKVHFSISTHEESLQLKTKAVSYSVILRITDNLKNLIGEGGFGKVYYGNLENNVHVAVKLLSQSSMQGFREFRSEVELLMVIHHRHLVRLIGYCEEGAVRALIYEYMANGNLQQHLSKENLNVLKWNERLQIALDAALGLDYLHNGCKPPVVHRDLKTSNILLDENMQAKISDFGLSRAFANDVDSHVTTCPAGTPSYLDPEFQSSGNLTKKSDVYSFGIIFLELVTGQPVLRRELGTVHYVLTWVTPKLEMGDIQSIIDPKLEGXYSTNSAWKLLEIAMCCTTASGVERPDISHVVAELKECLALTKSIGWNSTSDLETASLGSDSGLIPYAR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral638g00010 496 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 269 473 - -
Pral638g00010 496 ProSitePatterns Protein kinases ATP-binding region signature. 199 221 IPR017441 GO:0005524
Pral638g00010 496 PANTHER OS07G0107800 PROTEIN-RELATED 1 466 - -
Pral638g00010 496 FunFam Leucine-rich repeat receptor-like kinase 1 125 - -
Pral638g00010 496 Gene3D Phosphorylase Kinase; domain 1 175 268 - -
Pral638g00010 496 ProSiteProfiles Protein kinase domain profile. 193 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral638g00010 496 Gene3D Transferase(Phosphotransferase) domain 1 269 480 - -
Pral638g00010 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Pral638g00010 496 FunFam receptor-like protein kinase FERONIA 159 268 - -
Pral638g00010 496 SUPERFAMILY L domain-like 39 114 - -
Pral638g00010 496 SMART serkin_6 193 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral638g00010 496 SUPERFAMILY Protein kinase-like (PK-like) 179 462 IPR011009 -
Pral638g00010 496 Pfam Leucine rich repeat 44 99 IPR001611 GO:0005515
Pral638g00010 496 Gene3D Ribonuclease Inhibitor 2 124 IPR032675 -
Pral638g00010 496 CDD STKc_IRAK 199 464 - -
Pral638g00010 496 Pfam Protein tyrosine and serine/threonine kinase 195 462 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral638g00010 Pral-Chr638 180216 183471 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral638g00010 2 496 Receptor kinase-like Gene Family AT1G51850 45.802 1.71e-154 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral638g00010 PK_Tyr_Ser-Thr 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral638g00010 - - pcin:129289896 592.808