Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral638g00004 ATGGTTGTTCACCATAGACATTTGGTTTCTTTGATTGGATATTGCGAAGAAACTGGTGCAAGGGCATTAGTTTATGAGTACATGGCTAATGGTGACCTCCGGCAACATCTATCAGGTAATAACCAGCATACTTTGAAATGGAAGAATAGGCTTCAAGTTGCACTAGACGCAGCGCGTGGATTAGAATATTTGCATGATGGTTGTAAGCCAGCAATAGTACACAGGGATTTGAAGACCACTAACATTTTGCTAGATGAAAATATGGAAGCTAAAATTGCAGATTTTGGATTATCTAGAGCTTTTGCAAATAATATTGATAGTCATATCTCAACTCGTCCAGCTAGGACTATTGGTTACCTTGAACCCGAGTTTCAAAGTTCTGGCAACCTTACAAAAGGAAGTGATATTTATAGTTTTGGGATAATTCTGCTAGAGCTAATCACTGGACAACCAGCAGCAAAAAAGCATCCAAGCAATACCGTCAGTCTCCTTCTTCAATGGGTTACCCCTAAAGTTAAAAAGAAGGATATCCAGTACATTGTTGATCCAAGATTCCAAGGAAAATATAATGTCGATTCGGCTTGGAAATTTCTGGAGATAGCCATGTCATGCACTGCACCAACTGCAATTCAAAGGCCAGTCATAAGTCAAGTAGTTTATGAGCTAAGGGAATGTTTGGCAATGGAGATAAGCATCGAAGTGACCAGCAGCGACCACCCCAACAATTCAAGCAGTTCCATGAATACGAGTGCTTTGCAATTTGATTCAGACCTCAGTATATTGTCTGGAAGATAG 795 0.4 MVVHHRHLVSLIGYCEETGARALVYEYMANGDLRQHLSGNNQHTLKWKNRLQVALDAARGLEYLHDGCKPAIVHRDLKTTNILLDENMEAKIADFGLSRAFANNIDSHISTRPARTIGYLEPEFQSSGNLTKGSDIYSFGIILLELITGQPAAKKHPSNTVSLLLQWVTPKVKKKDIQYIVDPRFQGKYNVDSAWKFLEIAMSCTAPTAIQRPVISQVVYELRECLAMEISIEVTSSDHPNNSSSSMNTSALQFDSDLSILSGR 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral638g00004 264 Pfam Protein tyrosine and serine/threonine kinase 3 221 IPR001245 GO:0004672|GO:0006468
Pral638g00004 264 Gene3D Phosphorylase Kinase; domain 1 1 28 - -
Pral638g00004 264 SUPERFAMILY Protein kinase-like (PK-like) 3 222 IPR011009 -
Pral638g00004 264 SMART serkin_6 4 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral638g00004 264 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Pral638g00004 264 PANTHER OS07G0107800 PROTEIN-RELATED 1 233 - -
Pral638g00004 264 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 28 235 - -
Pral638g00004 264 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral638g00004 264 Gene3D Transferase(Phosphotransferase) domain 1 29 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral638g00004 Pral-Chr638 16882 18305 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral638g00004 3 259 Receptor kinase-like Gene Family AT1G49100 50.000 6.72e-84 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral638g00004 PK_Tyr_Ser-Thr 9.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral638g00004 - - pcin:129289894 395.586