Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral638g00003 ATGGATCGGAGACCACAGTGGATTTTATGGGTTGCCTTGATCCAACTTTTCCTGAATCTTAGCGACGCAATGCTCAGTGGAAGGAAAATCAGTGGCACTACTAGCAACACTCATTCGGATTTCATAAGCATTGACTGTGGAGCAAACGACGAATACACTGACCGTCAAACTGGGATTTCATATCAGACAGACGCAGGTTTTGTAGAGACAGGGTCTAATACTATGGTGGCACCTGATGAGAGATATGACGTATTTCATCCTTATTTTGGGAGACAACTGCAGACACTAAGAAGTTTCCCTGAAGGAAGAAGGAATTGCTACACTCTGAAACCAAAACAAGGCAAAAACCAAAGTTACCTCATCCGAGCTTTCTTCGCATATGGAAATTATGATGGCAAAAATCAAACTCCCTGTTTCGACTTATACCTGGGTGTCAATTATTGGACAAATGCTTGTCCGATAATTAAAAATTCTTATTTTACGGAGATCATCCACACTCCCACGACTGACACCATCCATGTTTGCCTTGTCAAGTCAGGCAAAGGAATGCCTTTCATTTCTACATTGGAACTACGACCTCTCAACAATTCTATTTATACAACTCCCTCCCCTTCTCAATCACTTTTAGTTCTTGAAGCGAGAGTTAATGTTGGCTACGTTAGTAATAATACATCACTATACATCAGGTGGTACATGGATGACATCTATGATCGTATGTGGGGCGGGGACAACAAGTTGAACTTGACAGATTGGCATGTGTTCAATAAATCTGTGGATATTGATCCCCAGAGAACAATTGATCCTTACAGATTACCAGCAGGAGTTCTACTATCTGCAGCCAAATCATCGAATCGCTCCTCTCCTTTAAACTTTGACTGTGGTTCTTCTGGGGGCGGTCTATTTCAATATTCTTTCACATATTTCGTCTATTTTCATTTTGTTGAAATTGAGAAGCTTCCCCTTGGGCAGAAAAGAGTGATCGATATTACTGTTAACGATGAAAAATTCCTCCCAAAGCCCATAACTCTTGAATACCTGAAGCCGCAGACCGTTTCTGCAGCTACAAATCAAAGTTGTCTTCGTTTCAGCATAAGTGCAACATCAGAATCTGCTGCGCCTCCAATCCTCAATGCATTCGAGGTCTATCAATTAAAATCACCTCTAACTTTACCAACAGACCAAAGAGACGTGGATGCCATCTGGGACATCAAAATCGCATACAAAATCTCTAAATTGGATTGGCAAGCTGACCCATGTATTCCCAATTACGCATGGGAGGGACTTATGTGCAGTTCTGGCACCAGCCACTCTTACGCAAGGATCACCTCATTAAACTTGAGCACGAGCAAGTTAACAGGACACATAAGTATTTCATTCTCAGAACTTACGGAGTTAGAGTCCCTGGATTTGTCAGATAATAACTTATCAGGAACAATACCAGAATTTCTAGCTAAATTGCCGAAGTTGAAAGTCCTTAATTTGAGAGGCAACGAGCTTACTGGTTCAATTCCGAATATTCTGAAGGAGAAGTCAGATTTGGAAATGAGTTTGGATGGTAACCCTGATCTTTGCTTGACGGCTCGATGCAAAAAACATAAGTTCGCTATTCCCCTGATACCCTCTGTCTCTGCTTTGATCGTTGTAATCTTGGTTTTGCTTGGAATATGGATCTTTAGGATAAGAAGACTGAAAGGGAATTTTACTAGGCATGAATCATCAAAATTAAGAAGTAAAGCATTTTCTTACTCTAACGTTCTTGAGATCACTAATAACTCACAGAACTTAATTGGAGAAGGAGGATTTGGAAAGGTTTATTTAGGCACTCTTAAGAATGATACTCAAGTTGCAGTAAAATTACTTTCTCAATCATCAGTGCAAGGTCATAGAGAATTTCGATCAGAGGTAGAACTCTTGATGGTTGTTCATCATAGACACTTGGTCTCTCTGATTGGGTATTGCAAAGAAACTGGTGCAAGGGCATTAATTTATGAGTATATGGCTAATGGTGACCTCCGTCAACACTTGTCAGGTAACAACAGGCATGCTTTGAAATGGAAGAACAGGCTTCAAATTGCACTAGATGCAGCACGTGGATTAGAATATTTGCATGATGGTTGTAAGCCAGCAATAGTACATAGAGACTTGAAGACTACTAACATTTTGTTAGATGAAAATATGGAAGCTAAGATTGCTGATTTTGGATTGTCTAGAGCATTTGCAAATGATATCGATAGCCATGTCTCAACTCGTCCAGCTGGGACAATTGGTTATCTTGATCCCGAGTAA 2286 0.4038 MDRRPQWILWVALIQLFLNLSDAMLSGRKISGTTSNTHSDFISIDCGANDEYTDRQTGISYQTDAGFVETGSNTMVAPDERYDVFHPYFGRQLQTLRSFPEGRRNCYTLKPKQGKNQSYLIRAFFAYGNYDGKNQTPCFDLYLGVNYWTNACPIIKNSYFTEIIHTPTTDTIHVCLVKSGKGMPFISTLELRPLNNSIYTTPSPSQSLLVLEARVNVGYVSNNTSLYIRWYMDDIYDRMWGGDNKLNLTDWHVFNKSVDIDPQRTIDPYRLPAGVLLSAAKSSNRSSPLNFDCGSSGGGLFQYSFTYFVYFHFVEIEKLPLGQKRVIDITVNDEKFLPKPITLEYLKPQTVSAATNQSCLRFSISATSESAAPPILNAFEVYQLKSPLTLPTDQRDVDAIWDIKIAYKISKLDWQADPCIPNYAWEGLMCSSGTSHSYARITSLNLSTSKLTGHISISFSELTELESLDLSDNNLSGTIPEFLAKLPKLKVLNLRGNELTGSIPNILKEKSDLEMSLDGNPDLCLTARCKKHKFAIPLIPSVSALIVVILVLLGIWIFRIRRLKGNFTRHESSKLRSKAFSYSNVLEITNNSQNLIGEGGFGKVYLGTLKNDTQVAVKLLSQSSVQGHREFRSEVELLMVVHHRHLVSLIGYCKETGARALIYEYMANGDLRQHLSGNNRHALKWKNRLQIALDAARGLEYLHDGCKPAIVHRDLKTTNILLDENMEAKIADFGLSRAFANDIDSHVSTRPAGTIGYLDPE 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral638g00003 761 FunFam Leucine-rich repeat receptor-like protein kinase 568 665 - -
Pral638g00003 761 FunFam Leucine-rich repeat receptor-like kinase 395 526 - -
Pral638g00003 761 Pfam Protein tyrosine and serine/threonine kinase 593 761 IPR001245 GO:0004672|GO:0006468
Pral638g00003 761 ProSitePatterns Protein kinases ATP-binding region signature. 596 618 IPR017441 GO:0005524
Pral638g00003 761 ProSiteProfiles Leucine-rich repeat profile. 464 487 IPR001611 GO:0005515
Pral638g00003 761 SMART serkin_6 590 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral638g00003 761 Gene3D Transferase(Phosphotransferase) domain 1 666 761 - -
Pral638g00003 761 Gene3D Phosphorylase Kinase; domain 1 565 665 - -
Pral638g00003 761 PANTHER OS07G0107800 PROTEIN-RELATED 42 761 - -
Pral638g00003 761 Pfam Malectin-like domain 44 383 IPR024788 -
Pral638g00003 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Pral638g00003 761 SUPERFAMILY Protein kinase-like (PK-like) 575 761 IPR011009 -
Pral638g00003 761 Pfam Leucine rich repeat 440 499 IPR001611 GO:0005515
Pral638g00003 761 PRINTS Leucine-rich repeat signature 465 478 - -
Pral638g00003 761 PRINTS Leucine-rich repeat signature 486 499 - -
Pral638g00003 761 ProSiteProfiles Leucine-rich repeat profile. 488 510 IPR001611 GO:0005515
Pral638g00003 761 Gene3D Ribonuclease Inhibitor 404 526 IPR032675 -
Pral638g00003 761 SUPERFAMILY L domain-like 421 513 - -
Pral638g00003 761 ProSiteProfiles Protein kinase domain profile. 590 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral638g00003 761 FunFam Os07g0541700 protein 666 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral638g00003 Pral-Chr638 2931 7582 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral638g00003 38 761 Receptor kinase-like Gene Family AT2G19230 44.993 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral638g00003 Malectin_like 8.8e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral638g00003 - - pcin:129289896 929.472