Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral638g00001 GTAAATTTGTTGACTATCGTTCACCATAAAAACCTGGTTTCTTTTGTGGGGTATTGTGACGAAGGTGACGTGAAAGCATTGATCTATGAATATATGGACCAGGGGAATCTGCAAGGGCTATTGTCAGGTAGAAATCCAAATGTCTTGAAGTGGTCAGAAAGACTTCAAATTGCTGTGGATGTTGCACTTGGATTGGACTATTCGCATAATGGTATTAGGCCACCAGTAGTTCATAGAGACTTGAAGACTTCCAATATTTTGTTGAATAAAAAGATGCAAGGCAAGATTTCTGATTTTGGACTCTGTAGACCTTTCATAAATGAAAATGACGCTCATATATCAACCATACCAGCAGGCACATTTGGCTATCTTGATCCCGAATTTCAAAGAACTGGAAAGTTGAACAAAAAGAGTGATGTCTACAGTTTTGGGGTAATTTTGCTGGAGCTGATCACAGGGCAACGTCCTATAAAAGAAGAGGCATCACTTGAAAACAAGAGTCACTTGCTTCATTGGGTTAATCGTAAACTTAAGAATGGAGATATTAAATCTATAGTTGATCCCAGGTTACAAGGAGAATATAATACAAGTTCAGCTTGGAAATTTATAGAGACTGCTATGGGCTGCGTTCCACCTAAAGCGATCCAAAGGCCTGACATTAGTGAAGTATTAAGTGAGCTGAAGATCTGTTTAAACTTGAACCAACAACAGACCCATACTCGTGAAAGATCAGAGACAGAGAGCAGCAGAAGAAATCCCAACAATTCATTGGATATGGGCTCTCTGAACTCACTGGGTATTGAATCAACAGCAGGCCCATATGCTAGATAA 831 0.3947 VNLLTIVHHKNLVSFVGYCDEGDVKALIYEYMDQGNLQGLLSGRNPNVLKWSERLQIAVDVALGLDYSHNGIRPPVVHRDLKTSNILLNKKMQGKISDFGLCRPFINENDAHISTIPAGTFGYLDPEFQRTGKLNKKSDVYSFGVILLELITGQRPIKEEASLENKSHLLHWVNRKLKNGDIKSIVDPRLQGEYNTSSAWKFIETAMGCVPPKAIQRPDISEVLSELKICLNLNQQQTHTRERSETESSRRNPNNSLDMGSLNSLGIESTAGPYAR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral638g00001 276 Gene3D Transferase(Phosphotransferase) domain 1 33 256 - -
Pral638g00001 276 SUPERFAMILY Protein kinase-like (PK-like) 2 227 IPR011009 -
Pral638g00001 276 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 32 240 - -
Pral638g00001 276 PIRSF ILK 1 247 - -
Pral638g00001 276 MobiDBLite consensus disorder prediction 250 268 - -
Pral638g00001 276 Pfam Protein tyrosine and serine/threonine kinase 3 226 IPR001245 GO:0004672|GO:0006468
Pral638g00001 276 ProSiteProfiles Protein kinase domain profile. 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral638g00001 276 SMART serkin_6 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral638g00001 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Pral638g00001 276 PANTHER OS07G0107800 PROTEIN-RELATED 1 236 - -
Pral638g00001 276 Gene3D Phosphorylase Kinase; domain 1 1 32 - -
Pral638g00001 276 MobiDBLite consensus disorder prediction 235 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral638g00001 Pral-Chr638 174 1497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral638g00001 1 253 Receptor kinase-like Gene Family AT1G49100 50.951 2.58e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral638g00001 PK_Tyr_Ser-Thr 2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral638g00001 - - qsa:O6P43_018241 327.405