Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral625g00003 ATGGCTCCATCAAGAAAATACCAAAGCAATCTCAAGAATCTCATGTCTTCACTTTCTTCTGTTGCCTCAACCAGCAATGGATTTGGTAACAGAACTGCAGGTAGTAATGAAGATAAGGTGTATGGGCTTTATCTTTGTAGAGGGGATGTGAATTCAAGTTTATGTCATTCTTGTGTTCAAGATTCTAGCAGATTGATCCAACAGCATTGTCCCAATAATGCTACTGCAGTTTTATGGTACCCATTTTGCCTTCTCAGGTACTCAAACCAGGATTTCTTCGACAATCTAACGCTAAGGCCTCGGATTCCCATGTTTGATGCATCACAAAACTTCACGAGTGCAGGAGAGTTCGACAGTGACGCTACGATTCTGATGAACGGTTTGATACAGACAGGTTCAAAGACAAACCTGATGTTTGGGACACACGTCTTCAACATAAATGGCACCCAGAAAAGGTATGGTTGGGTTCAGTGCAGCAGAGACATAACCAATGATGAGTGCAGAACATGTCTGAGCAATATGCTAGAAGATGTTGAGAATTGCTGTGAAGGCAAGAAGGTTTGGAGAATCTTTTCTCCTAGCTGTATTGTTATGTATGAGACTCAGCCTTTCTTTGTAAATTATCCCGGGTTGATTGCTCCAGCGCCCCAGCCAGGTGAGGAAAGTAGTAACAGGCCAATGCTTATAGTTATCGTTGTTATAAGTGTAGTAGTAGTACTAGCTCCACTGGCTTTCTGCACAATCTACCTGAGGTTCTTGAGAAAGAAAAAAGACAAACAAGCAGTGCAGGAAGATGGGCTAAATCCAGTATTTTCTCAGGATCAAACTGACGAAGAGAATTCTATGAGTACTGAACTTCTGATGATGTCCCTGAAAACTATTCTTCAAGCCACTTGTAACTTTTCTGAAGAATGTAAATTGGGAAAAGGTGGATTTGGCTCTGTTTACAAGGGTGTTTTATCTGATGGGAAGGAAATAGCAGTAAAGAGGCTGTCAAAAACTTCAGGGCAAGGATTAAAAGAGTTTAAGAATGAAGTGATCTTGATTGCAAAATTGCAGCATCGGAACCTTGTGAGATTGTTAGCTTGCTGCATTGAGCAAAATGAAAAACTACTTGTTTATGAGTACATGCCTAATTCTAGCCTCGATTTTCACCTCTTCAATATGGAGAAGCGTTCCCAGCTGGAATGGAAGCTGCGATTGAGCATCATTAACGGAATTGCAAAAGGACTTTTATATCTCCATGAAGACTCTAGACTAAGGGTTATTCATAGGGATCTAAAAGCTAGTAATATACCATTAAACCATGAAATGAATCCAAAAATTTCTGATTTTGGATTAGCAAGAGCTTTTGGAGGCGACCAAAGGCAAGCAAATACTATTAGAGTTGTGGGTGGTTATATGGCTCCAGAATATGCTATGGAAGGCTTGTTTTCAATAAAATCAGATGTTTTCAGCTTTGGTGTTCTCCTACTAGAAATCATTAGTGGAAAAAAGAATGGTGGATTCTATCTTTCACAGCACCGTCAAAGCCTTCTCACATAT 1545 0.4006 MAPSRKYQSNLKNLMSSLSSVASTSNGFGNRTAGSNEDKVYGLYLCRGDVNSSLCHSCVQDSSRLIQQHCPNNATAVLWYPFCLLRYSNQDFFDNLTLRPRIPMFDASQNFTSAGEFDSDATILMNGLIQTGSKTNLMFGTHVFNINGTQKRYGWVQCSRDITNDECRTCLSNMLEDVENCCEGKKVWRIFSPSCIVMYETQPFFVNYPGLIAPAPQPGEESSNRPMLIVIVVISVVVVLAPLAFCTIYLRFLRKKKDKQAVQEDGLNPVFSQDQTDEENSMSTELLMMSLKTILQATCNFSEECKLGKGGFGSVYKGVLSDGKEIAVKRLSKTSGQGLKEFKNEVILIAKLQHRNLVRLLACCIEQNEKLLVYEYMPNSSLDFHLFNMEKRSQLEWKLRLSIINGIAKGLLYLHEDSRLRVIHRDLKASNIPLNHEMNPKISDFGLARAFGGDQRQANTIRVVGGYMAPEYAMEGLFSIKSDVFSFGVLLLEIISGKKNGGFYLSQHRQSLLTY 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral625g00003 515 Gene3D - 103 204 IPR038408 -
Pral625g00003 515 Gene3D - 1 92 IPR038408 -
Pral625g00003 515 SMART serkin_6 301 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral625g00003 515 Pfam Salt stress response/antifungal 109 201 IPR002902 -
Pral625g00003 515 Pfam Salt stress response/antifungal 4 90 IPR002902 -
Pral625g00003 515 SUPERFAMILY Protein kinase-like (PK-like) 281 499 IPR011009 -
Pral625g00003 515 ProSiteProfiles Gnk2-homologous domain profile. 99 204 IPR002902 -
Pral625g00003 515 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 377 468 - -
Pral625g00003 515 Gene3D Transferase(Phosphotransferase) domain 1 377 515 - -
Pral625g00003 515 FunFam Cysteine-rich receptor-like protein kinase 28 1 91 - -
Pral625g00003 515 ProSiteProfiles Gnk2-homologous domain profile. 1 92 IPR002902 -
Pral625g00003 515 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 513 - -
Pral625g00003 515 ProSiteProfiles Protein kinase domain profile. 301 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral625g00003 515 FunFam Cysteine-rich receptor-like protein kinase 10 102 204 - -
Pral625g00003 515 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 268 376 - -
Pral625g00003 515 Gene3D Phosphorylase Kinase; domain 1 264 376 - -
Pral625g00003 515 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Pral625g00003 515 Pfam Protein tyrosine and serine/threonine kinase 305 498 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral625g00003 Pral-Chr625 23662 27235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral625g00003 7 515 Receptor kinase-like Gene Family AT4G05200 42.669 5.20e-142 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral625g00003 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral625g00003 - - gmx:100798691 786.563