Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral608g00004 ATGGATCCCTATAATGAAGAGTTGATGAAAGCACTCCAACCTGTCAACCGTCCTCCGTCTTCTTATCCTTCTTCTGATCTCCTCAATCCCTGCATCCAAACACGCCCCATCAGGCTCAACCAGCTCACACCATCTCAGATTCGTGAAATTCAATCCCGAATCCAGAAACACAAGAAGACGCATCACCATGTTGCTTCCCCTTCATCCCAACGTAATCCAGCGAAACTCTACAGAGGAGTCCGACAGCGACATTGGGGTAAATGGGTCGCTGAGATCCGACTTCCCAAGAACCGTACCCGTCTCTGGCTCGGCACCTTCCATACTGCAGAGCAGGCTGCTTTAGCCTACGACAACGCAGCCTTCAAGCTCAGAGGAGACTTTGCCAGGCTCAATTTCCCTCACCTACGCCACCATGGAGCTCATGTGATCGGTGAATTCGGCCATTACGAGCCCCTTCCTTCATCTGTGCACGCCAAGCTCCAAGCTTTGTGTGAAAGCTTAGGAGACAATTCCCAGAAACAGGGGAATGCAGAGAAGCATCTTCACAACACACATGATTCTGCTACTCTCTCCGGCTTAGCTTCCTCGTCCGATGAGTCGGACATTACTTACTTGGATTTCTCGGATTCTAAAGTGGATGAAACAGAGGTCGTTGGTTTGGAGAGGTACCCTTCCATTGAGATTGATTGGTCCGCTATCTGA 702 0.5014 MDPYNEELMKALQPVNRPPSSYPSSDLLNPCIQTRPIRLNQLTPSQIREIQSRIQKHKKTHHHVASPSSQRNPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFHTAEQAALAYDNAAFKLRGDFARLNFPHLRHHGAHVIGEFGHYEPLPSSVHAKLQALCESLGDNSQKQGNAEKHLHNTHDSATLSGLASSSDESDITYLDFSDSKVDETEVVGLERYPSIEIDWSAI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral608g00004 233 ProSiteProfiles AP2/ERF domain profile. 76 133 IPR001471 GO:0003700|GO:0006355
Pral608g00004 233 SMART rav1_2 76 139 IPR001471 GO:0003700|GO:0006355
Pral608g00004 233 Gene3D AP2/ERF domain 76 134 IPR036955 GO:0003700|GO:0006355
Pral608g00004 233 CDD AP2 75 135 IPR001471 GO:0003700|GO:0006355
Pral608g00004 233 FunFam Ethylene-responsive transcription factor 2 75 134 - -
Pral608g00004 233 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Pral608g00004 233 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Pral608g00004 233 Pfam AP2 domain 77 125 IPR001471 GO:0003700|GO:0006355
Pral608g00004 233 SUPERFAMILY DNA-binding domain 76 134 IPR016177 GO:0003677
Pral608g00004 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 18 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral608g00004 Pral-Chr608 34227 35029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral608g00004 2 233 AP2-EREBP Transcription Factor Family AT4G39780 49.231 2.46e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral608g00004 AP2 2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral608g00004 K09286 - gmx:100818839 249.98