Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6077g00007 ATGGCCTCCTGCGACGACGACGACTTCTCCCTCCTCAGTGACGATCATCACCAATCAAGCGCTGGCCCCCACCACCACCTTCACCAAACCTACGCACCGCATTCCTTCTCATCCGCCGTCACGCCTGTGCCGTCGGAACCGGTAGGTGACACCAGCGAAGTCTATGGATTTGATAACGAGGCCGACGACAACGACAAGCGAACTGATCGGGAGGAGGCCGGCGACGGTACGACGTCGTACGGATACAAAAGGCCCAAGCTTTCGAACGGCGGGGAGTATAGGAAGGATAGGGAGGAGTGGAGCGACGCCGCGATTGTTTGCCTGCTTGAGGCTTATACAGAGAAGTTCACTCAGCTGAATCGCGGGAACCTTAGAGGGAGGGATTGGGAGGAAGTGGCGTCAATAGTTAGTGAGCGGTGCGAAAATCAAACCAAGAGTGTGGAGCAATGCAAGAATAAAGTCGATAATTTGAAGAAGAGGTATAAGTTGGAAAGGCATAGGATGAGCAATGGCTGCATTTCAGCCAGTCATTGGCCTTGGTTCAAGCAGATGGAACAGATCGTTGGCAATTCGCTATCTACAAAGTATGTGCAGGATGAAGACAAGGGGATCGGTTCTGGGGGGAATTCGCCGAGACAACCGAAGAGATATGGAGTCGCAATGTCCAGCAGTGGAGGTCAGCTGAATAGCTTGAAGTCAAAACCAATGTCAAATGTTAGATGGCGTAGGGTAGTCTTCAAAATTAGCGGAGCAGCTCTTACTGGATCTGCTACCTGCAATATTGACCCAAAGGTGGCCACGTTAATTTCAAAAGAAGTTGCCATAGCCTCTCGCAACGGTGTGGAGGTGGCCATTGTTGTTGGAGGTCGTAACTTTTTCTGTGGAGATGCATGGGTAACTGCCACTGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCTACTGTGATGAATTCTATATTACTCCAATCAACTCTAGAGAAGATGGGCGTTCAAACTCGTGTACAAACTACCATTGCCATGCATGAATTTGCTGAACCATACAATAGGCAGCGGGCCATTAGACATCTTGAGAAAGGCAGAGTTGTTATATTTGGCGGCATTGGTTTTGGCACTGGAAATTCACTCTTTTCAACTGATATAGCTGCAGCTCTTCGAGCTTCTGAGATTAATGCGGAGGCTGTTCTCAAGGGTACTAATGTAGACGGTGTGTATGACTGCAACTCCCGGGATGGCAATTTCACCTTTGAGCACATTTCCTTCAGGGAGCTGGTTTCAAGAGGTGCCACCTCTATGGATATGACGGCACTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTTAATCTCCTGGAGCCTGGGAACATCTCAAAAGCCTTGTGCGGAGAACAAGTCGGTACACTAATTGACCAAACCGGATCCATGAGCTGA 1443 0.49 MASCDDDDFSLLSDDHHQSSAGPHHHLHQTYAPHSFSSAVTPVPSEPVGDTSEVYGFDNEADDNDKRTDREEAGDGTTSYGYKRPKLSNGGEYRKDREEWSDAAIVCLLEAYTEKFTQLNRGNLRGRDWEEVASIVSERCENQTKSVEQCKNKVDNLKKRYKLERHRMSNGCISASHWPWFKQMEQIVGNSLSTKYVQDEDKGIGSGGNSPRQPKRYGVAMSSSGGQLNSLKSKPMSNVRWRRVVFKISGAALTGSATCNIDPKVATLISKEVAIASRNGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTTIAMHEFAEPYNRQRAIRHLEKGRVVIFGGIGFGTGNSLFSTDIAAALRASEINAEAVLKGTNVDGVYDCNSRDGNFTFEHISFRELVSRGATSMDMTALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGSMS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6077g00007 480 Pfam Myb/SANT-like DNA-binding domain 97 187 IPR044822 -
Pral6077g00007 480 Coils Coil 140 167 - -
Pral6077g00007 480 MobiDBLite consensus disorder prediction 199 233 - -
Pral6077g00007 480 CDD AAK_UMPK-PyrH-Ec 242 474 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pral6077g00007 480 PANTHER URIDYLATE KINASE 93 478 - -
Pral6077g00007 480 Hamap Uridylate kinase [pyrH]. 239 474 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pral6077g00007 480 MobiDBLite consensus disorder prediction 1 95 - -
Pral6077g00007 480 Gene3D - 100 163 - -
Pral6077g00007 480 Pfam Amino acid kinase family 243 453 IPR001048 -
Pral6077g00007 480 MobiDBLite consensus disorder prediction 31 45 - -
Pral6077g00007 480 Gene3D - 236 474 IPR036393 -
Pral6077g00007 480 MobiDBLite consensus disorder prediction 59 77 - -
Pral6077g00007 480 FunFam Aspartate/glutamate/uridylate kinase family protein 100 163 - -
Pral6077g00007 480 MobiDBLite consensus disorder prediction 216 233 - -
Pral6077g00007 480 FunFam Uridylate kinase isoform A 233 479 - -
Pral6077g00007 480 SUPERFAMILY Carbamate kinase-like 240 473 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6077g00007 Pral-Chr6077 40492 45004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6077g00007 71 191 Trihelix Transcription Factor Family AT3G14180 39.024 5.69e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral6077g00007 AA_kinase 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6077g00007 - - gmx:100805176 732.25