Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6076g00002 ATGTTTGAGTCTTACAAAGTTCCTTTAGGTCATTCACTTAGCCTCAACCACTATGAGAAGACATGCCCTGATCTGGAGTTCATTGTTGCCAAGGTCGTGGGGAAAGCAGCTTCTAAGGACAAAACTGTTCCTGCAGCACTTCTTCGAATGCACTTCCATGATTGTTTCATTAGGGGATGCGATGCCTCAGTGCTGCTAAAATCAAAAGGAAACAAAAAAGCAGAAAAGGATGGGCCGCCAAATATTTCTTTGCACGCATTCTATGTCATTGATAATGTGAAGAGCGAAGTAGAAAAGTCATGCCCCGGTGTGGTCTCTTGTGCTGACATCCTAGCACTAGCAGCAAGGGATGCAGTTTTTCTGTCTGGAGGTCCAGCTTGGGATGTACCTAAAGGAAGAAAGGATGGTAGAACATCTCTGGCCAGTGAAACCAGACAATTGCCAGCACCCACCTTCAACATATCACAGTTGCTGCAGAGCTTCTCTCAAAGAGGTCTGTCGACAGAGGATCTGGTCGCGTTGTCAGGAGGACACACTTTAGGTTTCTCTCATTGTTCGTCCTTCCAAAACAGAATCCACAATTTCAATGCTACGCACGATGTGGATCCTTCATTAAATCCGTCCTTTGCTGGAAAATTGAAGTCAATTTGTCCACTGAAAAATCAGGCAAAGAAGGCTGGCACCACCATGGACCCTTCTTCGGCTACTTTTGATAACACATATTTCAAGGCAATCCTCCAAGGGAAGAGCTTATTTTCTTCTGACCAAGCTCTGCTTGATACCCCAAAGACTAAGGAATTGGTGACTAAGTTTGCTACCTCAAAAGAGGCCTTCTTCAAATCTTTTGCCAATTCGATGATCAAAATGAGTAGCATCAATGGTGGGCAGGAGATTAGGGAGAACTGCAGGGTTGTCAACTAG 921 0.4473 MFESYKVPLGHSLSLNHYEKTCPDLEFIVAKVVGKAASKDKTVPAALLRMHFHDCFIRGCDASVLLKSKGNKKAEKDGPPNISLHAFYVIDNVKSEVEKSCPGVVSCADILALAARDAVFLSGGPAWDVPKGRKDGRTSLASETRQLPAPTFNISQLLQSFSQRGLSTEDLVALSGGHTLGFSHCSSFQNRIHNFNATHDVDPSLNPSFAGKLKSICPLKNQAKKAGTTMDPSSATFDNTYFKAILQGKSLFSSDQALLDTPKTKELVTKFATSKEAFFKSFANSMIKMSSINGGQEIRENCRVVN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6076g00002 306 Pfam Peroxidase 30 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 CDD secretory_peroxidase 13 305 IPR033905 GO:0004601|GO:0042744
Pral6076g00002 306 SUPERFAMILY Heme-dependent peroxidases 13 306 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 FunFam Peroxidase 148 289 - -
Pral6076g00002 306 PRINTS Plant peroxidase signature 46 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Plant peroxidase signature 169 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Plant peroxidase signature 123 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Plant peroxidase signature 22 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Plant peroxidase signature 104 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Plant peroxidase signature 85 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 Gene3D Peroxidase, domain 2 148 289 - -
Pral6076g00002 306 ProSiteProfiles Plant heme peroxidase family profile. 12 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PANTHER PEROXIDASE 25-RELATED 15 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 FunFam Peroxidase 16 156 - -
Pral6076g00002 306 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Haem peroxidase superfamily signature 44 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 PRINTS Haem peroxidase superfamily signature 170 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral6076g00002 306 Gene3D - 16 306 - -
Pral6076g00002 306 ProSitePatterns Peroxidases proximal heme-ligand signature. 170 180 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6076g00002 Pral-Chr6076 5720 10348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6076g00002 11 305 Peroxidase AT5G42180 68.243 2.25e-153 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6076g00002 K00430 - qsa:O6P43_033577 506.523