Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6066g00007 ATGATGGCGCCAAATTTGAACTTGGAACCTGAAAATCATTCGGAAGATAGTAGCCAAGTAGCTTCCAATATATCCTTGCAAGAAACGTCCCATGATCTTACCAAGGACAGCAATACCACATCTTCCTGTCTCACAAATCTCACAAAACCTGAAACTGATCCAGTGTCTTTTTCCCTCGACTTGACCCTCAACTTCAACTCCAATGATGGTGAGTTGAAGCGCGCAAGTGATGCCAGCAGTGAAGTGGGAGCTGAAGCTCAACCTTCAGGATCAGCAGTTCCCAGGGTTTTCTCTTGTAATTACTGTAGGAGGAAGTTCTTCAGTTCTCAGGCATTGGGCGGCCATCAAAACGCTCATAAAAGGGAGAGGACAATGGCGAAGCGTGCCATGCGAATGGGGATGTTCACCGAGAGGTATACAAGCCTGGCATCACTGCCTCTTCATGGTTCTGCTTTTCGGTCTCTCGGTATAGAAGCTCATGCTGCGATGCACCAAAGACCCATGCCATCACTGAGGGCTCCCGACTTAAGAGCCGGAGCAAAATTTGAGAAAGATTATTTTGGACCACAAATGTTCATGGAAGATGATGATAGTATGGGTCTGTTTTGGCCTGGGAGTTTCCGGCAGGTGGAAGGTGGAGCCGGCGTTAGTATGGGACACGAGCACCCTCAAACTTCAACTACTAGTTTTGTAGCAATTGCACCACCGCCGCCGCCACCACCACCACCCCCACAACCACAAACATCCACATCTCCTGATCTCACTCTGAAGCTCTAA 777 0.4865 MMAPNLNLEPENHSEDSSQVASNISLQETSHDLTKDSNTTSSCLTNLTKPETDPVSFSLDLTLNFNSNDGELKRASDASSEVGAEAQPSGSAVPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSAFRSLGIEAHAAMHQRPMPSLRAPDLRAGAKFEKDYFGPQMFMEDDDSMGLFWPGSFRQVEGGAGVSMGHEHPQTSTTSFVAIAPPPPPPPPPPQPQTSTSPDLTLKL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6066g00007 258 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Pral6066g00007 258 MobiDBLite consensus disorder prediction 213 258 - -
Pral6066g00007 258 FunFam Zinc finger protein 2 73 143 - -
Pral6066g00007 258 Gene3D Classic Zinc Finger 80 144 - -
Pral6066g00007 258 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Pral6066g00007 258 MobiDBLite consensus disorder prediction 1 49 - -
Pral6066g00007 258 MobiDBLite consensus disorder prediction 10 49 - -
Pral6066g00007 258 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
Pral6066g00007 258 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 14 172 IPR044246 GO:0009788
Pral6066g00007 258 MobiDBLite consensus disorder prediction 232 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6066g00007 Pral-Chr6066 29429 32212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6066g00007 91 258 C2H2 Transcription Factor Family AT1G66140 43.979 3.89e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral6066g00007 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6066g00007 - - gmx:100775305 350.903