Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6063g00004 ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCCCCCGATGGGCTTCTTGAGATCTGTGAGAGAGTTTATGTTTTCGACTGCTGCTTCATGACGGATGCTTGGAATGAAGAAAACTATAAAGTCTACATGGACGGAATTGTTGCTCAACTTCGAGAGCACTTTCCTGATGCTTCGATCTTGGTCTTCAATTTCCGCCAGGAAGAAACGAAGAGTCAGATGGCTAACATCTTGTCAGATTATGATATGACTATAATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTCAAGATGGAGGTCATCCACCACTTTTTACGGTCGAGTGAAAGTTGGCTCTCGCTTGGGCAGCATAATGTTCTGTTGATGCACTGTGAACGTGGTGGCTGGCCGGTTTTGGCTTTCATGCTGGCTGCGCTTTTGATTTATCGAAAGCAATACAGCGGAGAACAGAGAACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCAGTTTTTGTCACCGTTAAATCCGATTCCTTCCCAGCTGCGGTATCTGCAGTATATTTCCAGGAGGAATGTGGCCATAGATTGGCCGCCATTGGACAGGGCGCTTACGTTGGACTGCATCATTCTCAGATGTTTCCCGAACTTTGATGGGGAAGGTGGATGCTGTCCTGTATTTCGAATTTATGGACAAGATCCTTTTCTTGCAGATAAAACTCCAAAAATCTTGTATTCAACACAGAAGAAAAATAAAACCATCCGGTTTTACAAGCAGGGAGAGTGTGAACTAATTAAAATTGACATCAACTGTCATATCCAAGGTGACGTTGTGATTGAATGCATTAACTTGACCAGTGATATGGACCACGAACGGATGATGTTCCGAGTCATGTTCAACACAGCTTTTATTAGGTCCAACATATTGATGCTTAACCGGGATGAAGTTGATATTTTATGGGATGCTAAGGATGACTTCCCCAAGGATTTCAGAGCGGAGATCCTTTTCTCAGAGATGGATGCTGCTGCTGCTGTTATTGCGGATGGTACCTCATGCTTTGAGGAGAAGGAGGGACTGCCAGTGGAAGCATTTGCCAAAGTTCAGGAGATCTTTAACCATGTGGACTGGTTGAATCCTAAGGCTGATGTTGCACTAAATGTACTCCAACAAATTAGTGCTTCGGTGCATGACCAGATAGATAGAATTTCTACTCAGCAGCATGATACTGGATCTTTGTTGCATGAAAAAGATTCTAGAGTGCCTCAGGGAAAAAAGAATGAAGCAAAAAGGTTATTGTCATCAAATAATGAATCCCCGGAGTTTGGTAAACCTGTGACAAGTTCTACAAAGTTTGATGTAGAAGCACAAGTGCATGATCTTGCCATGTCTAGTTCTGTAGACATTTCTAGTGAATCACTTTCACCAAACACACCTCCACAGAATCCTTCCTTGCTTAGAAAATCTGATACTCCACCCAACACACAACTACCTTCTTATCTTTCCCCTCTAGGACCAGGATATCCTGTTACTGGCGAATTTGAAGCCCAATCAAAAGACAGAAGCGAGTCATCAATCTTTAGTTCAACATCTGGAACATCATTATCAAGTGTCTTTCCAAATAAGTTGCCTCTTGACGCTGCTTCCCATTTTTCAGCTTCATCTATGACTTCAACTCAGCCATCTCCTTCCCTTACAACCCCTATGAAGGAGATTCTACCTGTTAGAACTAGACCTGCTTCATCCACTTCACAACCTCCAGCACCACCCACACCCACGACTCCTCCTCAAAAGGAGCATAAACTGGTTAGAGCTGTACCTCCCCCGCCGCCGCCACCTCCACCTCCACAGAAAAAGCAATCACCGGTTAGAGTCATGCCTCCTCCACCCCCACCAATGGAAGAACCACATTTTCGACACCCTCCTCCCCAACGGCCTCCTCTAAAGGAGGAGCCTAACGTTAAAACTGGACCACCACCCCCTCCACCACCTCCTTTGAAGGTGCAGCCACCTCCCCCTGCTGCAGAACTCTCCTCCAAGAACCCTAATCCTTTGTTGCAGAATTCTACATCTGTTCCTGCTGCTCCTAATGCTCCTCCACCTCCTGTTCCCATTAGTAAAGGAGATCTAAAATCAGGGGATGGAAATATTGCATCTAGTACGATAGGACCCCGAGGACGAATTCTATCTCGTACAATAAGTAACAAAAATCAAAATAAAAAGCTGAAGCCGTTGCATTGGCTGAAAATATCTAGAGCAGTGCAAGAGTTGTGGCATGAGGCAGCGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGCCCTGCCAAGAAAGTAGGTGGCAGAAGCTCAGCTGGGCCTAAATCTGATAAAGTGCAACTGGTTGAGCACAGAAGAGCATATAATTGTGAAATCATGCTTTCAAAAGTAAAAGTGCCATTGCAAGATTTGATGAGCTCAGTGCTAGCACTAGAGGACTCAGCACTAGACATTGATCAGGTTGAAAACCTTATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTCAAGGGTTATACTGGAGAAAAGGAGAAGTTAGGGAGGTGTGAACAGTTCTTCCTAGAGTTGATGAAAGTACCACGGGTAGAGTCCAAACTCAGAGTGTTTTCATTCAAGATTCAGTTCCAATCTCAGGTTTCTGACCTTAGAAAAAGCCTGAATATTGTAGATGCTACTGTAGAAGAGATTAGGAATTCTTTCAAATTGAAGAGAATTATGCAAACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCTAGAGGTTCTGCTATTGGATTCAGATTGGACAGCCTTCTTAAACTCACTGAGACACGAGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGGCTGACAAATTACCTGAAGTTCTAGACTTCTCCAAGGATCTTTCTAACCTAGAGCCTGCAGCAAAGATCCAATTGAAGTTTTTGGCAGAGGAGATGCAAGCTGTAAGCAAAGGATTAGAGAAAGTTATCCAGGAACTCTCAACCTCTGAAAATGATGGTCCTATATCTGAGACATTCCGCAAGACTTTGAAAGACTTCCTCCGTTCTGCTGAAGCTGAAGTTCGATCACTGGCTTCATTATACTCTGGCGTGGGTAGGAAAGTGGACGCGTTGATTGTTTATTTTGGTGAAGATCCATCTCGCTGCCCTTTTGAGCAAGTTGTGTCAACCTTGCTCAACTTCACGAGGATGTTTTACAAAGCCCATGAAGAAAACTGCAAGCAGCTTGAGCTTGAAATGAAGAAATCATCTGATAGTGAGAAAAAGATATGTGAATCACAAAGGATACTGCCTACAGCAATCCGGACCGGCAACGTCAAGTGA 3432 0.4414 MTLLRKLFFRKPPDGLLEICERVYVFDCCFMTDAWNEENYKVYMDGIVAQLREHFPDASILVFNFRQEETKSQMANILSDYDMTIMDYPRQYEGCPVLKMEVIHHFLRSSESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKQYSGEQRTLDMVYRQAPRELLQFLSPLNPIPSQLRYLQYISRRNVAIDWPPLDRALTLDCIILRCFPNFDGEGGCCPVFRIYGQDPFLADKTPKILYSTQKKNKTIRFYKQGECELIKIDINCHIQGDVVIECINLTSDMDHERMMFRVMFNTAFIRSNILMLNRDEVDILWDAKDDFPKDFRAEILFSEMDAAAAVIADGTSCFEEKEGLPVEAFAKVQEIFNHVDWLNPKADVALNVLQQISASVHDQIDRISTQQHDTGSLLHEKDSRVPQGKKNEAKRLLSSNNESPEFGKPVTSSTKFDVEAQVHDLAMSSSVDISSESLSPNTPPQNPSLLRKSDTPPNTQLPSYLSPLGPGYPVTGEFEAQSKDRSESSIFSSTSGTSLSSVFPNKLPLDAASHFSASSMTSTQPSPSLTTPMKEILPVRTRPASSTSQPPAPPTPTTPPQKEHKLVRAVPPPPPPPPPPQKKQSPVRVMPPPPPPMEEPHFRHPPPQRPPLKEEPNVKTGPPPPPPPPLKVQPPPPAAELSSKNPNPLLQNSTSVPAAPNAPPPPVPISKGDLKSGDGNIASSTIGPRGRILSRTISSXKNQNKKLKPLHWLKISRAVQGXLWHEAAKSGEASKAPEIDMSELESLFSAAVPSSGPAKKVGGRSSAGPKSDKVQLVEHRRAYNCEIMLSKVKVPLQDLMSSVLALEDSALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFQSQVSDLRKSLNIVDATVEEIRNSFKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPEVLDFSKDLSNLEPAAKIQLKFLAEEMQAVSKGLEKVIQELSTSENDGPISETFRKTLKDFLRSAEAEVRSLASLYSGVGRKVDALIVYFGEDPSRCPFEQVVSTLLNFTRMFYKAHEENCKQLELEMKKSSDSEKKICESQRILPTAIRTGNVK 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6063g00004 1145 Gene3D - 196 340 - -
Pral6063g00004 1145 MobiDBLite consensus disorder prediction 644 675 - -
Pral6063g00004 1145 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Pral6063g00004 1145 MobiDBLite consensus disorder prediction 550 720 - -
Pral6063g00004 1145 ProSiteProfiles Formin homology-2 (FH2) domain profile. 730 1129 IPR015425 -
Pral6063g00004 1145 PANTHER FORMIN-J 1 1127 - -
Pral6063g00004 1145 SUPERFAMILY Formin homology 2 domain (FH2 domain) 655 1120 - -
Pral6063g00004 1145 SMART PTEN_C2_2 197 336 IPR014020 -
Pral6063g00004 1145 Pfam Formin Homology 2 Domain 733 1103 IPR015425 -
Pral6063g00004 1145 SMART it6_source 730 1140 IPR015425 -
Pral6063g00004 1145 MobiDBLite consensus disorder prediction 518 537 - -
Pral6063g00004 1145 MobiDBLite consensus disorder prediction 550 564 - -
Pral6063g00004 1145 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Pral6063g00004 1145 MobiDBLite consensus disorder prediction 460 498 - -
Pral6063g00004 1145 MobiDBLite consensus disorder prediction 397 447 - -
Pral6063g00004 1145 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Pral6063g00004 1145 MobiDBLite consensus disorder prediction 426 447 - -
Pral6063g00004 1145 MobiDBLite consensus disorder prediction 408 424 - -
Pral6063g00004 1145 MobiDBLite consensus disorder prediction 580 634 - -
Pral6063g00004 1145 MobiDBLite consensus disorder prediction 460 538 - -
Pral6063g00004 1145 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Pral6063g00004 1145 Gene3D Formin, FH2 domain 727 1114 IPR042201 -
Pral6063g00004 1145 Coils Coil 1104 1124 - -
Pral6063g00004 1145 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6063g00004 Pral-Chr6063 36713 46463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6063g00004 1 482 Protein tyrosine phosphatase (PTP) family AT5G58160 61.100 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6063g00004 - - aprc:113848377 1537.32