Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6063g00001 ATGGGTGAGAAGGCCAAAGATTCTTGCCATTCCGCGTTGCTCCACGGGAAGTACGAGCTCGGTCGTCTTCTGGGTCACGGCACTTTTGCTAAGGTCTACCATGCCAAGAACTTGCAGAGCGGGAAAAGCGTGGCTCTGAAGGTGGTGGGCAAAGAGAAAGTAATCAAAGTGGGCATGATGGAGCAAATCAAGAGGGAGATTTCTGTGATGAAGATGGTTGAGCATCCCAACATCGTTGAGCTGTATGAGGTTATGGCGAGCAAATCCAAGATCTACATCGCTATGGAGCTCGTTCGAGGCGGCGAGCTCTTCAACAAGATCGCAAGAGGTCGCCTGAGGGAAGACGTCGCACGAGTCTATTTCCAGCAGTTGATCTCCGCCATCGATTTCTGCCACAGTCGCGGCGTTTACCACCGGGATCTCAAGCCGGAGAATCTGCTTCTCGACGAGGATGGGAATTTGAAGGTCACTGATTTTGGCCTGAGCACGTTTGCTGAGCACTTGCGCCAAGATGGGTTGCTTCACACCACTTGTGGTACTCCGGCGTACGTGGCACCGGAGGTAATTGGGAGGAAAGGCTACGACGGCGCCAAGACCGATATCTGGTCTTGTGGGGTCATCCTGTATGTGCTTCTCGCCGGATTCTTGCCCTTCCAGGATGACAACTTGATGGCTATGTACCGGAAAATCTACAGGGGAGACTTCAAATGCCCGCCGTGGTTCTCTTCCGACGCTCGCCGGCTGATAACAAAGCTTCTCGACCCGAACCCTAGCACCCGAATCACCATTTCCAAAATCATGGACTCGACCTGGTTCAAAAAATCTGTCCCTAAGAACATTGTGACGAAGGAGGAACAGGAATTCGATTTTGATTGCGAGAAATCAAAGCAACAAGCGCCGGCAACAATGAACGCGTTTCACATAATATCATTATCGGAAGGGTTCGATTTGTCTCCACTGTTCGAAGAGAAGAAGAGAGAGGAGAAGGAGGAGCTGAGATTCGCGACAACGAGGCCGGCGAGCAGCGTGATATCAAAACTAGAAGAGGTGGCGAAGGCGGAGAAGTTCAACGTGAAGAAGAGCGACACAAGAGTGAGACTGCAGAGACAGGAATGCGGAAGAAAAGGGAAGCTGGCGATTGCGGCGGACATATACGCCGTGACGCCGTCGTTTCTGGTGGTGGAAGTGAAGAAGGACAACGGCGATACCTTAGAGTATAACCAATTCTGCAGAAAAGAGCTCCGCCCTGCGCTGAAAGACATCGTGTGGACGTCGCCGCCGGAAAACTCCGCGCCTGCTTGA 1302 0.5223 MGEKAKDSCHSALLHGKYELGRLLGHGTFAKVYHAKNLQSGKSVALKVVGKEKVIKVGMMEQIKREISVMKMVEHPNIVELYEVMASKSKIYIAMELVRGGELFNKIARGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFAEHLRQDGLLHTTCGTPAYVAPEVIGRKGYDGAKTDIWSCGVILYVLLAGFLPFQDDNLMAMYRKIYRGDFKCPPWFSSDARRLITKLLDPNPSTRITISKIMDSTWFKKSVPKNIVTKEEQEFDFDCEKSKQQAPATMNAFHIISLSEGFDLSPLFEEKKREEKEELRFATTRPASSVISKLEEVAKAEKFNVKKSDTRVRLQRQECGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCRKELRPALKDIVWTSPPENSAPA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6063g00001 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Pral6063g00001 433 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6063g00001 433 CDD STKc_SnRK3 17 271 - -
Pral6063g00001 433 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Pral6063g00001 433 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Pral6063g00001 433 Gene3D Kinase associated domain 1, KA1 297 424 - -
Pral6063g00001 433 Gene3D Transferase(Phosphotransferase) domain 1 98 278 - -
Pral6063g00001 433 Pfam NAF domain 300 360 IPR004041 GO:0007165
Pral6063g00001 433 CDD CIPK_C 304 419 - -
Pral6063g00001 433 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6063g00001 433 Gene3D Phosphorylase Kinase; domain 1 9 97 - -
Pral6063g00001 433 FunFam Non-specific serine/threonine protein kinase 8 299 - -
Pral6063g00001 433 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Pral6063g00001 433 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 420 - -
Pral6063g00001 433 SUPERFAMILY Protein kinase-like (PK-like) 15 288 IPR011009 -
Pral6063g00001 433 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6063g00001 433 FunFam Non-specific serine/threonine protein kinase 298 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6063g00001 Pral-Chr6063 5457 7382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6063g00001 11 427 CBL-interacting serine-threonine protein kinases AT4G30960 76.706 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral6063g00001 Pkinase 1.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6063g00001 - K07198 qsa:O6P43_002997 765.377