Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6059g00001 ATGTCTCGCCCAACTCCGCCGCAAACTTTGCCGTCCCCGGCGCCCTCCACCGATGACAGATGTACCTTCTTCAATCAATCCATGGAGCTCGTCCAACTCCCATACCAGAGGTCAGCCGGAGCCCACGTCTCCCGCAGCCCCTCCCTCGCTGACCTCCTCAAACGCGTCGAAGATGCTCAAAACGATGCCGGCTCCCAATCCCACCACGTCCTCGACCTCGCTCCTCCTCCTCCTCCTCCTTCTCATTCCTTCGTCCTTTCCTTCACCCACTTGACTTATAGCGTTAAAGTCCGTCGCAAAATGAGCCTGTCCTCTTGCTTCTCTCCAAAACACATGGATTTGGATTCCTCGCCGGAAGTTCATGGTGTGGCTGAATCTGAATCGAAGACTACCAAAGTTTTGCTCAATGATATTTCCGGCGAGGCCCGTGATGGAGAAATCATGGCCGTTCTAGGCGCCAGCGGGTCTGGCAAATCAACACTGATCGACGCCCTCGCCAACAGAATCTCCAAAGAGAGCTTGAAAGGAATGATCACGTTAAACGGTGAAGCTTTGGATTCCAGTCTTCTGAAAGTGATTTCAGCTTATGTCATGCAGGACGATCTTCTCTTTCCCATGCTCACTGTGGAAGAGACCCTCATGTTTTCCGCTGAGTTCAGGCTTCCTCGCTCCCTCTCTAAGTCCAGAAAGAAGGCCAGAGTCCAAGCTCTCATCGACCAGTTGGGTCTCCGTAATGCCGCCAATACTGTCATCGGTGACGAAGGCCACCGTGGCGTCTCCGGAGGTGAAAGACGTCGCGTCTCCATCGGAATTGATATCATTCATGACCCGATCGTCCTGTTCCTCGACGAACCCACTTCAGGCCTTGACTCCACCAGCGCATACATGGTCGTCAAGGTGCTACAACGAATAGCTCAAAGCGGAAGCATCGTCATCTTGTCCATACACCAACCAAGTTACAGAATCGTCGGATTATTAGACCGGTTGATTTTCCTCTCACACGGTCAAACTGTATATAGTGGTTTGCCGGCGAATCTGCAGCGCTTCTTCTCGGAGTTCGGACACCCGATCCCCGATAACGAGAACCGCACTGAGTTCGCCCTCGACCTCATTCGTGAGCTCGAACAAAACAATGGTGGAACCAAAGGCTTAGTGGAGTTCAACAAGTCTTGGCAGTCGAATCAACTGAAAAGCAAACCCAACGGCCATGAAACCTCCATTAATGGACAAAGGGTTTCACTCAAGGACGCCATTGGCGCGAGCATTTCTCGAGGCAAGTTAGTCTCTGGGGCGCCAAATAATTCGAATCTCACAATGTCATCGTCTGTTCCAACCTTTGCAAACCCTTTCTGGATCGAAATGGCTGTGATAGCGAAGCGATCGCTGATCAATTCCAGAAGGATGCCCGAACTGTTTGGCATTCGATTCGGTGCAGTTCTCATAACCGGAATCATCCTGGCCACTATCTTCTGGCATCTCGACAGTTCTCCTAAAGGTGCTCAAGAACGATTAGGTTTCTTCGCCTTCGCCATTTCCACTACCTTCTACACCTGCGCCGAGGCTATGCCCGTCTTCCTCCAAGAGCGATACATCTTCATGAGAGAAACCGCCTACAACGCCTACCGTCGATCCTCGTACGTTCTGGCCCATTCAATCATCTCGATACCATCCTTAATTTTCCTCTCCTTAGCATTCGCCGCCACGACGTTCTGGGCGGTGGGTCTGGCCGGCGGCGCCTCGGGGTTCTTCTTTTACTTTTTGATCATCGTGGCGTCTTTCTGGGCAGGGAACTCCTTCGTGACGTTTCTTTCAGGAGTGGTTGCCCACGTGATGTTGGGCTTCACCGTGGTGGTTGCCATTATAGCATACTTCGTGCTGTTCAGTGGGTTCTTCATAAGCAGGGACAGAATTCCTGCGTACTGGATATGGTTTCACTATATTTCACTGGTGAAGTACCCATACGAGGGCGTTTTGCAGAACGAGTTTGACATTCAGCCTCCGAGGTGCTTCGTGAGAGGGACTCAGATGTTCGACATGTCGCCGCTGGGGGCGGTGCCGGAGACACTGAAGGTGGAGTTGCTGAAGAGTATGAGCAAGACGCTAGGGATGGACATAACGAGCTCGACGTGCGTGACCACGGGAATGGATATACTGAAGCAGCAGGGGATTACGGACCTGAGTAAGTGGGATTGCCTGTGGATAACCATTGCATGGGGATTTTTCTTCAGATTTCTGTTTTATCTGGCTTTGATGTTTGGAAGCAAGAACAAGAGGACCTAA 2280 0.5162 MSRPTPPQTLPSPAPSTDDRCTFFNQSMELVQLPYQRSAGAHVSRSPSLADLLKRVEDAQNDAGSQSHHVLDLAPPPPPPSHSFVLSFTHLTYSVKVRRKMSLSSCFSPKHMDLDSSPEVHGVAESESKTTKVLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRISKESLKGMITLNGEALDSSLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSRKKARVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVILSIHQPSYRIVGLLDRLIFLSHGQTVYSGLPANLQRFFSEFGHPIPDNENRTEFALDLIRELEQNNGGTKGLVEFNKSWQSNQLKSKPNGHETSINGQRVSLKDAIGASISRGKLVSGAPNNSNLTMSSSVPTFANPFWIEMAVIAKRSLINSRRMPELFGIRFGAVLITGIILATIFWHLDSSPKGAQERLGFFAFAISTTFYTCAEAMPVFLQERYIFMRETAYNAYRRSSYVLAHSIISIPSLIFLSLAFAATTFWAVGLAGGASGFFFYFLIIVASFWAGNSFVTFLSGVVAHVMLGFTVVVAIIAYFVLFSGFFISRDRIPAYWIWFHYISLVKYPYEGVLQNEFDIQPPRCFVRGTQMFDMSPLGAVPETLKVELLKSMSKTLGMDITSSTCVTTGMDILKQQGITDLSKWDCLWITIAWGFFFRFLFYLALMFGSKNKRT 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6059g00001 759 MobiDBLite consensus disorder prediction 1 21 - -
Pral6059g00001 759 Pfam ABC-2 type transporter 316 396 IPR043926 GO:0140359
Pral6059g00001 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 351 IPR027417 -
Pral6059g00001 759 SMART AAA_5 144 359 IPR003593 GO:0016887
Pral6059g00001 759 Pfam ABC-2 type transporter 456 662 IPR013525 GO:0016020|GO:0140359
Pral6059g00001 759 FunFam ABC transporter G family member 6 124 350 - -
Pral6059g00001 759 Pfam ABC transporter 135 287 IPR003439 GO:0005524
Pral6059g00001 759 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 118 359 IPR003439 GO:0005524
Pral6059g00001 759 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 66 747 - -
Pral6059g00001 759 ProSitePatterns ABC transporters family signature. 259 273 IPR017871 GO:0005524|GO:0016887
Pral6059g00001 759 Gene3D - 120 352 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6059g00001 Pral-Chr6059 1077 3647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6059g00001 110 319 Calmodulin-binding Proteins AT2G36910 28.372 4.24e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6059g00001 K05681 - qsa:O6P43_006742 1108.2