Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6056g00008 ATGGAACAAGCACGCCCTTATAAGTTTCTTGAGCAGTCTAAGGTTGGTCCTGCAATATCCCCAGGCAGAACCACTCTTCCCCTCACATTCCTAGATATCTCTCTTGCGGGTCCTATCTATGTCAGACGTCAATTCTTTTACCACTTTCCTTACCCTCCTCACTATTTCATCCGCACTACCCTTCCCTCTCTCAAACACTCTCTCTCCGTCGCACTCCAGCATTTCTTCCCTCTCGCCGGAAACCTCCTCTGTCCGCCGCCCCCTCAAAAGCCTTTTATCCGCTGCTCCCGTGACGATTCCATCACCTTAACTGTGGTCGAGTCCGCTTCTGATAATTTCAATCATTATTCAGCAAACTGCCCAAGGAATCTCAGAGAATTAGATAGCTTGGTTCCCGAGCTATCGTGGAGTACAGTGGATGGAAACGTCGATGGCACTGACGACCCCACGTTCGTCTTCCCAATCGTAGCCTTGCAAGTCACGGTTTTTCCTAACGCTGGCCTTTGTATCGCCATCACGTATTGCCACGTGATGGATGCTAATTGTTGCAGTCATTTCATGAAAACGTGGGCTTCTATACGTAGATTCGATGGTGGAGATATGACTTTTCTGGATAAGTCACCGCCGTCGTATGACAGGGAAGTGATCAAAGACCCGAGCGGCCTTGAAGCTGTTTTCTTGAGGGACTATTTCACGGAGAGGTCAACGTGGAAAGACAGTCTCGTGGGTAAAACTTCTAAGAGTATGCTTAGTGATGATGATGGCCTAAGTTACAAGGCTACGATTGTATTTGGCAGAAAAGACATCGAAGTACTGAGAAAGTGGGCAATGGATCAGTGGGGAAAAAATGACGGATCCCACGCACCGAGAAATCTATCAAAGTTTGTGGTGACATGCGGCTTTGTGTGGACATGTTATGTTAAGACGAGATATAGAGATGACGATGAAGAAGAGAAAGATGAGCACTTTCGTTTTGCAGCAGATTGCAGAAACCGCCTCGAGTATCCAGTGGAAAATAACTACTTCGGAAACTGCATAACGCGATGTAATGCAACGCTGAAGAGAAAAGAGCTGAAAGGAGAAGAAGGGTTTTTGAAGGCTGTGAAGGTGATTGAAAGGGCAATAGAAGACATGAAGAAAGAACCTTTCAAAGATGCAGAAAAGTGGAATGAGAAGTTCCAGAAAACGTTCGTGTTAGGAAGTACGGTGTTAGTGACGGGGTCGCCGAAATTCACCGTTTATGAGACTGACTTTGGATTTGGGAGACCTAAGAAGGTTGAAATGGTACATACCTTCAAGTGCATGTCTCTTGCTGAGAGTGGATCTGAAGAGGGTGGGCTTGAGGTTGGCTTGGTGTTTAGGACAGATGGATATGAACATTTTATGTCTGTCGTTGAACAGGGACTCCAAACTTTTAAACCCTAG 1425 0.4618 MEQARPYKFLEQSKVGPAISPGRTTLPLTFLDISLAGPIYVRRQFFYHFPYPPHYFIRTTLPSLKHSLSVALQHFFPLAGNLLCPPPPQKPFIRCSRDDSITLTVVESASDNFNHYSANCPRNLRELDSLVPELSWSTVDGNVDGTDDPTFVFPIVALQVTVFPNAGLCIAITYCHVMDANCCSHFMKTWASIRRFDGGDMTFLDKSPPSYDREVIKDPSGLEAVFLRDYFTERSTWKDSLVGKTSKSMLSDDDGLSYKATIVFGRKDIEVLRKWAMDQWGKNDGSHAPRNLSKFVVTCGFVWTCYVKTRYRDDDEEEKDEHFRFAADCRNRLEYPVENNYFGNCITRCNATLKRKELKGEEGFLKAVKVIERAIEDMKKEPFKDAEKWNEKFQKTFVLGSTVLVTGSPKFTVYETDFGFGRPKKVEMVHTFKCMSLAESGSEEGGLEVGLVFRTDGYEHFMSVVEQGLQTFKP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6056g00008 474 PANTHER - 8 471 - -
Pral6056g00008 474 Gene3D - 257 472 IPR023213 -
Pral6056g00008 474 Gene3D - 8 242 IPR023213 -
Pral6056g00008 474 Pfam Transferase family 15 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6056g00008 Pral-Chr6056 95585 97121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6056g00008 49 423 Monolignol Biosynthesis Gene Families AT5G48930 24.619 4.12e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6056g00008 - - gmx:100813271 603.979