Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6056g00004 ATGGAGTTTGACCTTGAAAATCCTTTGCAGAACTTTTGCGACCCTCCCTCTTCTCTCTTTCTCATCGAATCTCATCACATCCCACCCCAAACCTACTTTCGCACTCTCAAGTCCCGAGATTTCGACATCACAGTTAGAAGAGAGGTCATTTCTTTAATCTACCAGTTGTCCTGCACATTTGATCCGCTCTTGTCGTACCTTGCTGTTAACTATGTGGATCGCTTCCTTGCCAACCAAGGCATTTCGCAACCAAAGCCATGGATCCTCAGGCTCCTTGCAGTCTCTTGCCTCTCTCTAGCCGCCAAGATGACGAGAGCAGAATTTTCTGTCTCTGATATACAGGCCTTTCTGAAACAGGGTGAAGGGGGTATGATCTTTGAGGCCCCAACAGTGCGAAGAATGGAGTTACTTATCTTAGGAGCTCTAAAATGGCGAATGCGTTCGATCACTCCCTTCTCTTTCGTTCCCTTCTTCATTGCTTTGCTCAGACTCAAGGACCTGCCACTGAGGCATGTTCTGAAAGAACGAGCCACTGAAATTATAATCAGATCACAGAAAGAGATAAGGCTCTTGGAATTTAAGCCTTCTGTAGTTGCTGCATCAGCCCTTCTCTCTGCGTCTCACGAATTGCTACCTTTCCAATACCCTTGCTTCTTAAGAGCAATATTCGATTGTGCATATGTAAATAAAGAAAATATATTGAAGTGCAATAATGTGATACAAGACATAACAATGGAGGGGAACGAGTCTGCGTTCGATTTGGTTTCAAGTTCGGAGACACCTATTAATGTGTTAGACCATCATTTTCTGAGCTCAGAAAGCACAAAAACCGGCTCAATTACTATTGCTGCCTCTACTCTGAGACAAGAGAAGGACATTAAGAGAAGGAAAATAGCTGGTTACGGTGATAGTCATGCGCTCCAGATTTCTCAAATCGAACAATGCTGA 948 0.4399 MEFDLENPLQNFCDPPSSLFLIESHHIPPQTYFRTLKSRDFDITVRREVISLIYQLSCTFDPLLSYLAVNYVDRFLANQGISQPKPWILRLLAVSCLSLAAKMTRAEFSVSDIQAFLKQGEGGMIFEAPTVRRMELLILGALKWRMRSITPFSFVPFFIALLRLKDLPLRHVLKERATEIIIRSQKEIRLLEFKPSVVAASALLSASHELLPFQYPCFLRAIFDCAYVNKENILKCNNVIQDITMEGNESAFDLVSSSETPINVLDHHFLSSESTKTGSITIAASTLRQEKDIKRRKIAGYGDSHALQISQIEQC 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6056g00004 315 FunFam D6-type cyclin 29 144 - -
Pral6056g00004 315 Gene3D - 29 147 - -
Pral6056g00004 315 FunFam D6-type cyclin 145 238 - -
Pral6056g00004 315 Gene3D - 19 235 - -
Pral6056g00004 315 SUPERFAMILY Cyclin-like 131 245 IPR036915 -
Pral6056g00004 315 SMART cyclin_7 47 140 IPR013763 -
Pral6056g00004 315 SUPERFAMILY Cyclin-like 14 146 IPR036915 -
Pral6056g00004 315 SMART Cyclin_C_2 149 274 IPR004367 -
Pral6056g00004 315 Pfam Cyclin, N-terminal domain 23 146 IPR006671 -
Pral6056g00004 315 Pfam Cyclin, C-terminal domain 149 246 IPR004367 -
Pral6056g00004 315 CDD CYCLIN_AtCycD-like_rpt2 149 236 - -
Pral6056g00004 315 PANTHER CYCLINS 30 241 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6056g00004 Pral-Chr6056 64085 65917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6056g00004 1 295 Core Cell Cycle Gene Families AT4G03270 46.645 4.94e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6056g00004 K18812 - gmx:100799951 402.519