Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6056g00003 ATGACGAGAAGCCCTTACTATGACAAAAACGGAATAAAGAGAGGTGCGTGGAGTAAGGAAGAGGATGAAAGGTTAAGAGCATATGTTGAGATATATGGTCATAGAAATTGGCGCCAACTCCCCAAACACGCGGGTTTATCAAGGTGTGGAAAGAGTTGCCGACTTCGCTGGCTAAATCACCTTCGTCCGGGCGTAAAGCATGGAAATTACACCCAAGAAGAAGACGAACTCATCATCAAATTACATCAACAACTTGGAAATAAATGGTCTTTGATTGCCGAAAGATTACCAGGGAGAAGTGACAACGAGATTAAGAACCGTTGGCATAGCCACCTAAAGAAGCAACTGGAGTGCAATCAAGCGGACAAATTTGAGCTCAGAATGAATTCTAGTTGTACTTGTGAAAGAGAAACAACAAAGCATTTCGAACCTGAAAACCCTCTGCTTGGTTTCGTTGCTGCTTCCTCCGCTAATGTCTTGGAAAGCTCACCGATTGAAGAATCAAGCGATGCTAATAATGCCGCATGGGAAATAGTTGAAGAATTCGGGGATTTTGGGACCCAACCAATAACCATTGGTCCCAGAAAATATATATGA 597 0.4288 MTRSPYYDKNGIKRGAWSKEEDERLRAYVEIYGHRNWRQLPKHAGLSRCGKSCRLRWLNHLRPGVKHGNYTQEEDELIIKLHQQLGNKWSLIAERLPGRSDNEIKNRWHSHLKKQLECNQADKFELRMNSSCTCERETTKHFEPENPLLGFVAASSANVLESSPIEESSDANNAAWEIVEEFGDFGTQPITIGPRKYI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6056g00003 198 FunFam MYB-related transcription factor 13 66 - -
Pral6056g00003 198 CDD SANT 69 112 IPR001005 -
Pral6056g00003 198 CDD SANT 16 61 IPR001005 -
Pral6056g00003 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral6056g00003 198 SMART sant 66 114 IPR001005 -
Pral6056g00003 198 SMART sant 13 63 IPR001005 -
Pral6056g00003 198 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral6056g00003 198 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 154 - -
Pral6056g00003 198 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral6056g00003 198 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Pral6056g00003 198 Gene3D - 14 66 - -
Pral6056g00003 198 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral6056g00003 198 Gene3D - 68 142 - -
Pral6056g00003 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral6056g00003 198 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6056g00003 Pral-Chr6056 50577 51950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6056g00003 1 119 MYB Transcription Factor Family AT2G31180 63.025 3.41e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral6056g00003 Myb_DNA-binding 5.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6056g00003 K09422 - cit:102630815 207.608