Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6055g00002 ATGTCTTCCCAGAAGAGAACTCTTCTCAGAATACTCCTCACTGCAAATGGAAGCTGCGGCTGTGGCAGGCCCAAGCCCACCGACGTCTTCGAGCCCAAGCCCAAGCAAAAAAACCCGAACCCAATGGGCGGCTTCACATCTTCAACCGCCACCTCCGGCGACCGAATCTGCGCCCACTCAATCGACGAAGACGACGGGGATTTCACATCCACCACCGTGTCGGAAGCCGAGACGGAGACCCAGAGGAGCTGGAAGAATTCGAGTAACGTGATGGCGAAGCAGAGTCCGATAGTGAACAGCGTGGCGGTGGAGAAGGAGTCGGAGGATCCGTACAAGGATTTCCGGCACTCGATGCTGCAGATGATATTTGAGAAGGAGATGTACTCGGAATCCGATCTGGAGGAGCTTCTGGAAGCATTCCTGGAGCTGAACTCGCCGAGACAGCACGAGGTGATCGTGAAGGCGTACACGCAAATCTGCGAAGATGCGTTTCCAAATAATGATAATAACAAGAAGACGACGACGAACAAGAGCAAGGGGATGAGGCGTTATGGTCACGTGAGGAATCAGCCAGCGGCACGTGCGTAG 588 0.5459 MSSQKRTLLRILLTANGSCGCGRPKPTDVFEPKPKQKNPNPMGGFTSSTATSGDRICAHSIDEDDGDFTSTTVSEAETETQRSWKNSSNVMAKQSPIVNSVAVEKESEDPYKDFRHSMLQMIFEKEMYSESDLEELLEAFLELNSPRQHEVIVKAYTQICEDAFPNNDNNKKTTTNKSKGMRRYGHVRNQPAARA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6055g00002 195 MobiDBLite consensus disorder prediction 19 70 - -
Pral6055g00002 195 NCBIfam uncharacterized plant-specific domain TIGR01568 101 160 IPR006458 -
Pral6055g00002 195 MobiDBLite consensus disorder prediction 40 55 - -
Pral6055g00002 195 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 61 164 IPR038933 GO:0045892
Pral6055g00002 195 Pfam Transcriptional repressor, ovate 107 162 IPR006458 -
Pral6055g00002 195 MobiDBLite consensus disorder prediction 163 195 - -
Pral6055g00002 195 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Pral6055g00002 195 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6055g00002 Pral-Chr6055 9482 10232 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral6055g00002 Ovate 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6055g00002 - - pcin:129314681 276.559