Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6045g00007 ATGACAAAGTTTCTCATACCTCTCTTCATTCTGTACTTTGTGTCTTTCAATGCTAGAGCAGAGCAGAATTACTCAGGAAATTCAGCGCTCAACTGCTCCATCAACGATAAAAACGGGCCTTCCTCTGCTTTCCTTTATACCTGTAATGGCCTGAGCAAATCTTGTCTTGCCTTCCTCATGTTCAAGTCCCAACCTCCTTACAACACCGTCACCTCAATTTCTAATCTGACATCATCAGACTCAGAAAAGCTCGCAACAATCAATGATGCTTCTATGTTCACCGTGTTCCCAACTGGCAAAGAGGTAATTGTCCCTGTAAACTGTTCCTGCAAAACCACGGACTATTACCAGGCTGATACCAATTATACCTTGTCCACAACCCAAACTTATTTCGTAATAGCAAATGACACCTATGAGGGATTGGCCACTTGCGGTTCTCTCTTGCATTACAATCCATATGGGGCATTAGATTTGCATGCTGGCATGCAATTACATGTGCCTCTCCGATGTGCCTGTCCAACTCGGTCTCAAATCGCCAGTGGCATCAAGTATTTACTAACTTACCCGGTTGATTGGGGTGATAACGTATCTTCTCTTGCTACAAGATTCAAAGTGAGTTCAAGTTCTGTACTTGACGCTAATACGATTACCACACCCACTCTTTATCCATTCACAACTATTCTGATTCCCTTGCCCAGTGAACCTGAGAGCTCAACCACCATAGTTCACCCTGGTCGACCACCGACCTTTTCTCCTCCTGTTTCCCCTAACAAAAAAACCAAGTCAAAAAGGAAACTTTATGTTGCTGTTGCCGCCACAGGGGGGTTCGTGCTGGTTGTGTGCGTGGTTTTATTTTCTGTGTTTCTATTGAGGAAGAGATCGGCGACTTTCGTCGAGGGAGGTCAAATAAGGAAAACCAAATTTAAGTCTTCGGAAGAAATTCGTGATGAGATTGCAAGCATTGAGCATGTTTCTAAAGAGTACAAATTTCAGGAGATAAAGGAAGCGACCGAGAATTTCAGTTCAAAGAATAGAATTGGTGGCTCTGTGTATCGGGGATTGTTTGGCCAGGATATCTTGGCTGTCAAGAAAATGAGTACGGATGCGTCAAAGGAAGTGAATATGCTGAAGAAGATCAATCACTTCAACGTCATAAAGCTGCAAGGGTACTGTAAAAACGAAGGCTTCTTCTACCTTGTTTTCGAATACATGGAGAATGGCTCTCTCAGAGAGTGGCTAGGAAAAAACGTACCAATGGGGCATCAAAGTTGGGCCAAGAGGATCCAGATCGCTCTGGATATTGCCAACGGACTTCAATATCTTCACGACTTCACAGAACCTTGTTATGTTCACAAGGACATCAACACTAGCAACATTCTACTAAACAAGGACGCCAGGGCCAAGATTGCAAATTTTCGTCTTGCAAGAGAGTCGGAGGGGGATATAACGTTAACTTGCTCATCACAGGCGGTGGGAACTAGAGGCCACATGGCTCCAGAGTACCTAGAAGCAGGATTGGTTAGTCCCAAAATGGACGTGTACGCCTTTGGAGTTGTGTTACTGGAACTGATCACAGGGAAAGATTCTATCATTGTACAAGCTAGAAGTGAAGTAATGCTTTCTACGGTCATAGGATCTGTCGTGGCAAAGGACGATGCAGAAGCCGATCTTAGTTCGTTCATTGATCCTAGCCTTCGGGGAAGCAGTGGGAAAGCATGTGTCATTGAGCTAGCTGAAATAAGTGTGGCCTGCTTAGTCCAAGAACCAGCAAGGAGACCAAGCATGGCAGACATAGTTTCTAGCTTATTAAGGATACAGACGAATGTGCCTCCAAGAATATCTCCCACCATAAATAGCAACAGTCCACGCATGGGAAGGTAA 1881 0.4439 MTKFLIPLFILYFVSFNARAEQNYSGNSALNCSINDKNGPSSAFLYTCNGLSKSCLAFLMFKSQPPYNTVTSISNLTSSDSEKLATINDASMFTVFPTGKEVIVPVNCSCKTTDYYQADTNYTLSTTQTYFVIANDTYEGLATCGSLLHYNPYGALDLHAGMQLHVPLRCACPTRSQIASGIKYLLTYPVDWGDNVSSLATRFKVSSSSVLDANTITTPTLYPFTTILIPLPSEPESSTTIVHPGRPPTFSPPVSPNKKTKSKRKLYVAVAATGGFVLVVCVVLFSVFLLRKRSATFVEGGQIRKTKFKSSEEIRDEIASIEHVSKEYKFQEIKEATENFSSKNRIGGSVYRGLFGQDILAVKKMSTDASKEVNMLKKINHFNVIKLQGYCKNEGFFYLVFEYMENGSLREWLGKNVPMGHQSWAKRIQIALDIANGLQYLHDFTEPCYVHKDINTSNILLNKDARAKIANFRLARESEGDITLTCSSQAVGTRGHMAPEYLEAGLVSPKMDVYAFGVVLLELITGKDSIIVQARSEVMLSTVIGSVVAKDDAEADLSSFIDPSLRGSSGKACVIELAEISVACLVQEPARRPSMADIVSSLLRIQTNVPPRISPTINSNSPRMGR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6045g00007 626 SUPERFAMILY Protein kinase-like (PK-like) 323 604 IPR011009 -
Pral6045g00007 626 MobiDBLite consensus disorder prediction 238 257 - -
Pral6045g00007 626 SUPERFAMILY LysM domain 186 231 IPR036779 -
Pral6045g00007 626 Pfam Protein tyrosine and serine/threonine kinase 365 602 IPR001245 GO:0004672|GO:0006468
Pral6045g00007 626 Gene3D Phosphorylase Kinase; domain 1 301 403 - -
Pral6045g00007 626 ProSiteProfiles Protein kinase domain profile. 265 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6045g00007 626 Pfam LysM domain 193 230 IPR018392 -
Pral6045g00007 626 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 608 - -
Pral6045g00007 626 Gene3D Transferase(Phosphotransferase) domain 1 404 614 - -
Pral6045g00007 626 Gene3D LysM domain 185 230 IPR036779 -
Pral6045g00007 626 ProSiteProfiles LysM domain profile. 186 229 IPR018392 -
Pral6045g00007 626 FunFam PTI1-like tyrosine-protein kinase 3 404 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6045g00007 Pral-Chr6045 49261 51141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6045g00007 4 605 Receptor kinase-like Gene Family AT2G23770 40.161 2.25e-132 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral6045g00007 PK_Tyr_Ser-Thr 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6045g00007 - - gmx:100806221 756.518