Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6039g00004 ATGAGATACTCCACCTCTTCCTTCTTTCCACATTATTACCAGCCCATTGATATTACTTCCTTGGGCAAACAAGGTTCAAGTAAAAAGGGGGCCGTTATCGGGGGAGTTGTTGGAGGATTTGCTCTTGTTATGATCCTCCTGATATTATTTATCTGTATTAGACGATCAAAATACTCGAAGAGAATTCACAGAGGGGACATTACTATTGCAACTATGTTGAAAGGCCTGATTTCTTACAATTATAAGGATTTGAAGTTTGCAACTCAGAATTTTAGTGAAGAAACTAAACTAGGAGAAGGAGGATTTGGTGCTGTATATAAGGGCACTCTAAGGGATGGGAAAGTGGTTGCAGTCAAGAAGTTAACTTTACTCCACTCCAAGAAGATAGAGGAAGATTTTTTGAGTGAAGTGATGCTTATCAGTGATGCTCATCATCCGAATCTTATTCAACTTTTGGGATGGTGTAGTAAAGGCCGTGACAGAATCCTTGTATATGAATACATGAAGAACAATAGTTTGGACAGATTCATATTTGGTGAAAAGAAAGGTCATCTCAACTGGGAGCAGCGATACGCTATAATTTTGGGAATAGCAAGAGGCTTAACTTATCTCCATGAGCAATTTCAAGTCCGTATCATACACAGAGATATAAAGACCAACAACATTCTCTTAGATGATGATTTACAACCTAAAATTGCTGATTTTGGATTGGCAAGATTTTTACCTGAGGACAAATCTCATCTTAGTACAAAATTTGTGGGAACATTAGGATACACGGCACCAGAATATGCAATTCATGGTCAATTATCAGAGAAGGTTGATATTTACAGTTTTGGTATTGTACTCCTTGAAATCATTACTGGCCAGAAAAGCAAAGCATTCAAGGATCATGGTGATGCTGAAGATGAATTCCTCCTACCAAAAGTTTGGAAACTATATGAGAGAGGCATGCACTTAGAGTTGGTAGATCAGGCCTTGGACCTTACTGACTCGGAAGCAGAAAAAGTGAAGAAAGTCATAGAGATTGGTTTGCTTTGCACCCAAGCTTTTGCTGATTTAAGGCCAACAATGTCTGAAGTGATTGATTTGCTCCAAAACAATGGCTTATCGCATATGAGACCCTCTATGCCCGTCTTAATTATAACTAGTTAG 1152 0.3845 MRYSTSSFFPHYYQPIDITSLGKQGSSKKGAVIGGVVGGFALVMILLILFICIRRSKYSKRIHRGDITIATMLKGLISYNYKDLKFATQNFSEETKLGEGGFGAVYKGTLRDGKVVAVKKLTLLHSKKIEEDFLSEVMLISDAHHPNLIQLLGWCSKGRDRILVYEYMKNNSLDRFIFGEKKGHLNWEQRYAIILGIARGLTYLHEQFQVRIIHRDIKTNNILLDDDLQPKIADFGLARFLPEDKSHLSTKFVGTLGYTAPEYAIHGQLSEKVDIYSFGIVLLEIITGQKSKAFKDHGDAEDEFLLPKVWKLYERGMHLELVDQALDLTDSEAEKVKKVIEIGLLCTQAFADLRPTMSEVIDLLQNNGLSHMRPSMPVLIITS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6039g00004 383 SMART serkin_6 91 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6039g00004 383 FunFam Cysteine-rich receptor-like protein kinase 2 168 372 - -
Pral6039g00004 383 FunFam serine/threonine-protein kinase PBS1-like 58 167 - -
Pral6039g00004 383 CDD STKc_IRAK 97 366 - -
Pral6039g00004 383 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Pral6039g00004 383 Pfam Protein kinase domain 92 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6039g00004 383 SUPERFAMILY Protein kinase-like (PK-like) 70 364 IPR011009 -
Pral6039g00004 383 Gene3D Phosphorylase Kinase; domain 1 53 167 - -
Pral6039g00004 383 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 21 374 - -
Pral6039g00004 383 Gene3D Transferase(Phosphotransferase) domain 1 168 373 - -
Pral6039g00004 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Pral6039g00004 383 ProSiteProfiles Protein kinase domain profile. 91 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6039g00004 Pral-Chr6039 37219 40647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6039g00004 13 377 Receptor kinase-like Gene Family AT1G56120 43.014 9.13e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral6039g00004 Pkinase 2.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6039g00004 - - pcin:129300016 585.104