Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6039g00003 ATGATCCTCCTGATATTATTTATCTGTATTAGACGATCAAAATACTCGAAGAGAATTCACAGAGGGGACATTACTATTGCAACTATGTTGAAAGGCCTGATTTCTTACAATTATAAGGATTTGAAGTTTGCAACTCAGAATTTTAGTGAAGAAACTAAACTAGGAGAAGGAGGATTTGGTGCTGTATATAAGGGCACTCTAAGGGATGGGAAAGTGGTTGCAGTCAAGAAGTTAACTTTACTCCACTCCAAGAAGATAGAGGAAGATTTTTTGAGTGAAGTGATGCTTATCAGTGATGCTCATCATCCGAATCTTATTCAACTTTTGGGATGGTGTAGTAAAGGCCGTGACAGAATCCTTGTATATGAATACATGAAGAACAATAGTTTGGACAGATTCATATTTGGTGAAAAGAAAGGTCATCTCAACTGGGAGCAGCGATACGCTATAATTTTGGGAATAGCAAGAGGCTTAACTTATCTCCATGAGCAATTTCAAGTCCGTATCATACACAGAGATATAAAGACCAACAACATTCTCTTAGATGATGATTTACAACCTAAAATTGCTGATTTTGGATTGGCAAGATTTTTACCTGAGGACAAATCTCATCTTAGTACAAAATTTGTGGGAACATTAGGATACACGGCACCAGAATATGCAATTCATGGTCAATTATCAGAGAAGGTTGATATTTACAGTTTTGGTATTGTACTCCTTGAAATCATTACTGGCCAGAAAAGCAAAGCATTCAAGGATCATGGTGATGCTGAAGATGAATTCCTCCTACCAAAAGCTTGGAAACTATATGAGAGAGGCATACACATAGAGTTGGTGGATGATACCTTGGATCCTAATGATTATAATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTGCTGAATTAAGGCCATCAATGTCTGAAGTAATTGTTTTGCTTCAAGGCAATGACTTACTAGAGAATATGATGAAACCCGCTATGCCTATCATGATTGAAACTTAA 1026 0.3694 MILLILFICIRRSKYSKRIHRGDITIATMLKGLISYNYKDLKFATQNFSEETKLGEGGFGAVYKGTLRDGKVVAVKKLTLLHSKKIEEDFLSEVMLISDAHHPNLIQLLGWCSKGRDRILVYEYMKNNSLDRFIFGEKKGHLNWEQRYAIILGIARGLTYLHEQFQVRIIHRDIKTNNILLDDDLQPKIADFGLARFLPEDKSHLSTKFVGTLGYTAPEYAIHGQLSEKVDIYSFGIVLLEIITGQKSKAFKDHGDAEDEFLLPKAWKLYERGIHIELVDDTLDPNDYNAEEVKKIIEIGLLCTQASAELRPSMSEVIVLLQGNDLLENMMKPAMPIMIET 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6039g00003 341 FunFam serine/threonine-protein kinase PBS1-like 15 124 - -
Pral6039g00003 341 PIRSF ILK 28 334 - -
Pral6039g00003 341 SUPERFAMILY Protein kinase-like (PK-like) 27 321 IPR011009 -
Pral6039g00003 341 Pfam Protein kinase domain 49 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6039g00003 341 SMART serkin_6 48 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6039g00003 341 ProSiteProfiles Protein kinase domain profile. 48 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6039g00003 341 CDD STKc_IRAK 54 323 - -
Pral6039g00003 341 Gene3D Phosphorylase Kinase; domain 1 10 124 - -
Pral6039g00003 341 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 12 329 - -
Pral6039g00003 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Pral6039g00003 341 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Pral6039g00003 341 Gene3D Transferase(Phosphotransferase) domain 1 125 332 - -
Pral6039g00003 341 FunFam Cysteine-rich receptor-like protein kinase 2 125 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6039g00003 Pral-Chr6039 1700 40124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6039g00003 3 324 Receptor kinase-like Gene Family AT1G56120 49.068 1.09e-100 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral6039g00003 Pkinase 1.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6039g00003 - - pcin:129300016 541.191