Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6039g00001 ATGAGATACTCCACCTCTTCCTTCTTTCCACATTATTACCAGCCCATTGATATTACTTCCTTGGGCAAACAAGGTTCAAGTAAAAAGGGGGCCGTTATCGGGGGAGTTGTTGGAGGATTTGCTCTTGTTATGATCCTCCTGATATTATTTATCTGTATTAGACGATCAAAATACTCGAAGAGAATTCACAGAGGGGACATTACTATTGCAACTATGTTGAAAGGCCTGATTTCTTACAATTATAAGGATTTGAAGTTTGCAACTCAGAATTTTAGTGAAGAAACTAAACTAGGAGAAGGAGGATTTGGTGCTGTATATAAGGGCACTCTAAGGGATGGGAAAGTGGTTGCAGTCAAGAAGTTAACTTTACTCCACTCCAAGAAGATAGAGGAAGATTTTTTGAGTGAAGTGATGCTTATCAGTGATGCTCATCATCCGAATCTTATTCAACTTTTGGGATGGTGTAGTAAAGGCCGTGACAGAATCCTTGTATATGAATACATGAAGAACAATAGTTTGGACAGATTCATATTTGGTGAAAAGAAAGGTCATCTCAACTGGGAGCAGCGATACGCTATAATTTTGGGAATAGCAAGAGGCTTAACTTATCTCCATGAGCAATTTCAAGTCCGTATCATACACAGAGATATAAAGACCAACAACATTCTCTTAGATGATGATTTACAACCTAAAATTGCTGATTTTGGATTGGCAAGATTTTTACCTGAGGACAAATCTCATCTTAGTACAAAATTTGTGGGAACATTAGGATACACGGCACCAGAATATGCAATTCATGGTCAATTATCAGAGAAGGTTGATATTTACAGTTTTGGTATTGTACTCCTTGAAATCATTACTGGCCAGAAAAGCAAAGCATTCAAGGATCATGGTGATGCTGAAGATGAATTCCTCCTACCAAAAGCTTGGAAACTATATGAGAGAGGCATACACATAGAGTTGGTGGATGATACCTTGGATCCTAATGATTATAATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTGCTGAATTAAGGCCATCAATGTCTGAAGTAATTGTTTTGCTTCAAGGCAATGACTTACTAGAGAATATGATGAAACCCGCTATGCCTATCATGATTGAAACTTAA 1155 0.3775 MRYSTSSFFPHYYQPIDITSLGKQGSSKKGAVIGGVVGGFALVMILLILFICIRRSKYSKRIHRGDITIATMLKGLISYNYKDLKFATQNFSEETKLGEGGFGAVYKGTLRDGKVVAVKKLTLLHSKKIEEDFLSEVMLISDAHHPNLIQLLGWCSKGRDRILVYEYMKNNSLDRFIFGEKKGHLNWEQRYAIILGIARGLTYLHEQFQVRIIHRDIKTNNILLDDDLQPKIADFGLARFLPEDKSHLSTKFVGTLGYTAPEYAIHGQLSEKVDIYSFGIVLLEIITGQKSKAFKDHGDAEDEFLLPKAWKLYERGIHIELVDDTLDPNDYNAEEVKKIIEIGLLCTQASAELRPSMSEVIVLLQGNDLLENMMKPAMPIMIET 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6039g00001 384 ProSiteProfiles Protein kinase domain profile. 91 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6039g00001 384 SMART serkin_6 91 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6039g00001 384 FunFam serine/threonine-protein kinase PBS1-like 58 167 - -
Pral6039g00001 384 CDD STKc_IRAK 97 366 - -
Pral6039g00001 384 Pfam Protein kinase domain 92 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6039g00001 384 FunFam Cysteine-rich receptor-like protein kinase 2 168 372 - -
Pral6039g00001 384 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Pral6039g00001 384 Gene3D Phosphorylase Kinase; domain 1 53 167 - -
Pral6039g00001 384 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 21 372 - -
Pral6039g00001 384 Gene3D Transferase(Phosphotransferase) domain 1 168 375 - -
Pral6039g00001 384 SUPERFAMILY Protein kinase-like (PK-like) 70 364 IPR011009 -
Pral6039g00001 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6039g00001 Pral-Chr6039 1700 41768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6039g00001 13 367 Receptor kinase-like Gene Family AT1G56120 45.634 9.80e-104 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral6039g00001 Pkinase 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6039g00001 - - pcin:129300016 585.104