Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6034g00001 ATGGCCTCCGATGCACATGGCTCCCGTCACAAGCACCGGCGCTCATCTTCTCCCGAAGAAGTCGAGCGATCCTCTAAACGTCACAAGCACCGCCACCATGGCCACCGCCATCATCGGCACCGCCACGGTAGCAGGAAACACGAAGAGGAGCATGAACTCGATGCCGAAACTGTTAATAAGGTTCCTTCTCCAACTCTTGGTCCTGAGTCTGACAGGCCTGATGATGATGTGGAGGAGGGGGAGATTCTTGAAGAGGAGGGTCCCGGTGGCCGAGATGGTGAGATTGGAAAAAAGCATACGGAGTCCGATGCTGAGTCTGGTGAAATCATGGCCACGGGAGGTCGAGGTATTCGATCCGATAATTCAAATCCGGTACCTTCCACCGAAGAGATGTTGCATGGGAAGGACGCCATTCCCTCTAAAGAGAAAGTAGTGACTACTGCTAAAGGTTTAGAAACTAATAGTGAGGATATCAACAATGGTAGATTTATTAGTCCACGATTGGATGGAGAAGATGATACTCGCCATCAGGGACACACTGGTCACAGTAGAAATGAAGTTGATGGTTCTCCTACTCATTCAAGTGCGGAGTCCGTAGATGCTAAGCATGCTAGAGCTATTTCGGATGGTTTGGGCAATGGGTATTTGGATCGTAAATCTTCCAAAGAGGATAAATGGCCGCATGGGGAGCTTGGATGTTTTAAAGGAAATGAAAAGCTGAAAGGTGACTATGACAACGAAGATCTGGAGGTTAATGGAGGCAAATTAAGGATTCATAGGAAGAACTCCTCCCCTGAAAGTGGAGGTAGCAAATATAGGGCCAGGGAAAGCTCACCTAATTATAGGTGTAGGAGTCGATCCAGATCAAGTGGTCATACTCATAGTGTAATAGAAGAATATGCTCATTCCAGGAGGAGGAATGACGAGGAAAGAATTGGGGAATATGGCAGGGAGCGTGGACATGTGAGTAGGGATTTGGTGGCAGGTGATAGAAGGGAGCACAGTTCCAGCTATTACAGTCGGGAGGCCCGAGATAGAGATAGGAGCAAGGACAGGGATGGGGATAGGGACCTAAGAAGAGAAAAGGAACGGGAAAGGAGCCGGAATAGGGAGGATGATCGTGTGCATAGGAGGGGAAAAGAACGTGAAAGGAGTCATGAGAAGGATAGAAGGGATGTGGAAAAAAGAACGAAGAGAAAGGAGCGAGATAGAGAGAGGAGCTGGGAGATTGTGGCTGAGCGGCATAGAAGTGATAGGGGACGAGAGAGGAGTAGGGACAGAGGAAGGGTTGGGGAGAGAGATAGAGTTCGTGAGAGTGAAAGGGATGATAAACATCGAGAAAGAGATAAGATTAGGGAGAGGGAGAGGCGTAAGGATAGAAATGTTCTTGATAAAGATAAAAATCTGGGTTATGAGCATGGTAATGAGAGCCGGGACGGAGATATGCGCCGTAAGCATTTGAGACATGAAGAAGCAGAAAGCCATAGGGAGAAAAAAAGAAATTCTGAGTCTGTGACAGTTGATAAACCTGTGGACAGGGGTGAGGATGAACAAGATGACCTGGATGAGACGGTTACGTTGCCATTTGCAGAACAAGAAGAGGAAGACCTCAATAGAATTAAGGAGGAGAGTAGAAGGAGGAGGGAAGCAATCTTAGAGAAATATAAAAAGCAGCAACCAAGCAGCATCAACAAGAAGAACAAACTTCTGAAAATAAAAAAAAGTGGGTTACTTTTTATACTAAAACACGCTTTTGAACTATGGTTAGATAAGGATCCTGTGAATGTTCCGGCTACTGTTTCTGAAGCTCCTGATGCTAAGAACGATGGTGCTGATGTTTTTGAAACGGAACCATCTTTTGCTGTTGGTAAATCACCCCGAGAAAATGGAAATGATGCATCCGAAAAGATCCCTGGTGTTGCTGGGGGCTTGGGAGAGGGTTCACCAAAGAGTGAAAGATCCGATGACCAGTTTTGTGATGACATATTTGGTGAGACACCAACAGGAGTTCGCAAATCAGGCAAAGGGGATGGATTGCGTGTTGACAGGGGTGGATTGCATGACAATTGGGATGATGCAGAGGGGTATTACAGCTATCGTTTTGGTGAAATACTTGATGGTCGATATGAAGTCACAGCAGCTCATGGTAAAGGTGTCTTTTCAACAGTTGTTCGTGCAAAGAATCTAAAAGCTGGTAATGGTGAGCCAGAAGAAGTAGCTATAAAAATTATTCGTAATAATGACACCATGTACAAGGCTGGTATGGATGAGTTGGTCATACTAAAGAAATTAGTAGGTTCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCGTACGCGAAACAACTCTTTATTGCATTGAAGCATCTTCGGAACTGTGGTGTTCTCCATTGTGATATAAAGCCAGACAATATGTTGGTGAATGAAGCAAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCTATGTTTGCTGGAAAGAATGAAGTCACACCATACCTTGTGAGTCGCTTTTATCGTGCCCCTGAAATAATACTTGGCTTGTCATATGATCATCCGTTAGATATTTGGTCTGTTGGATGTTGTTTGTACGAACTTTATACTGGAAAAGTTCTTTTCCCAGGTGGTACTAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGTGCTTTTCCGAAGAAGATGCTTCGTAAGGGAGCATTTATTGATCAGCATTTTGACCAGGACTTGAATTTTCTTGCTACAGAAGAGGATCCAGTGACGAGAAAGGCTATAAAGCGGTTGATTCTCAACATGAAGCCCAAAGACATTGGAACTATCATTGCTGGCTCTCCTGGAGAGGATCCGAAGATGTTAGCTAATTTCAAAGATCTTCTGGACAAGGTTTTTGTCCTGGATCCGGAGAAGAGGTTGACAGTCTCACAAGCATTAAGCCATCCATTCATCACTGGCAAGTGA 3084 0.4458 MASDAHGSRHKHRRSSSPEEVERSSKRHKHRHHGHRHHRHRHGSRKHEEEHELDAETVNKVPSPTLGPESDRPDDDVEEGEILEEEGPGGRDGEIGKKHTESDAESGEIMATGGRGIRSDNSNPVPSTEEMLHGKDAIPSKEKVVTTAKGLETNSEDINNGRFISPRLDGEDDTRHQGHTGHSRNEVDGSPTHSSAESVDAKHARAISDGLGNGYLDRKSSKEDKWPHGELGCFKGNEKLKGDYDNEDLEVNGGKLRIHRKNSSPESGGSKYRARESSPNYRCRSRSRSSGHTHSVIEEYAHSRRRNDEERIGEYGRERGHVSRDLVAGDRREHSSSYYSREARDRDRSKDRDGDRDLRREKERERSRNREDDRVHRRGKERERSHEKDRRDVEKRTKRKERDRERSWEIVAERHRSDRGRERSRDRGRVGERDRVRESERDDKHRERDKIRERERRKDRNVLDKDKNLGYEHGNESRDGDMRRKHLRHEEAESHREKKRNSESVTVDKPVDRGEDEQDDLDETVTLPFAEQEEEDLNRIKEESRRRREAILEKYKKQQPSSINKKNKLLKIKKSGLLFILKHAFELWLDKDPVNVPATVSEAPDAKNDGADVFETEPSFAVGKSPRENGNDASEKIPGVAGGLGEGSPKSERSDDQFCDDIFGETPTGVRKSGKGDGLRVDRGGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGKGVFSTVVRAKNLKAGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGSDPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLSYDHPLDIWSVGCCLYELYTGKVLFPGGTNNDMLRLHMELKGAFPKKMLRKGAFIDQHFDQDLNFLATEEDPVTRKAIKRLILNMKPKDIGTIIAGSPGEDPKMLANFKDLLDKVFVLDPEKRLTVSQALSHPFITGK 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6034g00001 1027 SUPERFAMILY Protein kinase-like (PK-like) 696 1026 IPR011009 -
Pral6034g00001 1027 FunFam Serine/threonine-protein kinase PRP4 homolog 769 1025 - -
Pral6034g00001 1027 Pfam Protein kinase domain 711 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6034g00001 1027 MobiDBLite consensus disorder prediction 1 540 - -
Pral6034g00001 1027 MobiDBLite consensus disorder prediction 515 530 - -
Pral6034g00001 1027 CDD STKc_PRP4 708 1024 IPR044092 GO:0004674|GO:0006468|GO:0045292
Pral6034g00001 1027 MobiDBLite consensus disorder prediction 26 44 - -
Pral6034g00001 1027 FunFam serine/threonine-protein kinase PRP4 homolog 680 768 - -
Pral6034g00001 1027 Coils Coil 530 550 - -
Pral6034g00001 1027 Gene3D Transferase(Phosphotransferase) domain 1 769 1025 - -
Pral6034g00001 1027 MobiDBLite consensus disorder prediction 216 266 - -
Pral6034g00001 1027 PANTHER DUAL SPECIFICITY PROTEIN KINASE 391 1025 - -
Pral6034g00001 1027 SMART serkin_6 709 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6034g00001 1027 MobiDBLite consensus disorder prediction 147 161 - -
Pral6034g00001 1027 MobiDBLite consensus disorder prediction 84 105 - -
Pral6034g00001 1027 Gene3D Phosphorylase Kinase; domain 1 680 768 - -
Pral6034g00001 1027 MobiDBLite consensus disorder prediction 620 678 - -
Pral6034g00001 1027 MobiDBLite consensus disorder prediction 166 183 - -
Pral6034g00001 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Pral6034g00001 1027 MobiDBLite consensus disorder prediction 291 514 - -
Pral6034g00001 1027 ProSiteProfiles Protein kinase domain profile. 709 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6034g00001 Pral-Chr6034 1681 9619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6034g00001 716 1025 MAP Kinase Gene Family AT4G01370 33.016 1.23e-28 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pral6034g00001 Pkinase 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6034g00001 K08827 - gmx:100776908 1086.63