Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6016g00001 ATGGAAGTTCTGAGAACGAAGATAGCTATGAGGCTGATTTTCATATATCTAATCTTATTCTTCAATTACTGCTTCTTGTTTTGTGCAGCTTTTTCTTCTGACGCCATAACCATTGGCAAACCCTTTAGCGATAATGGAGAGCTTGTCATTTCTAAAGGAAGAAAATTTGCTCTTGGCTTCTTCTCTCCAGGCAAATCTGCCTTTCGCTTTGTTGGAATCTGGTACTATAACTTGCCAAAGCAAACTGTTGTTTGGGTTGCCAATAGAGATAATCCCATAAATGACTCTTCTGGAGTTCTCTTCCTCAACCCAAATAATGGAAATCTCGTCCTCCGCCAGAACTCTACCAACTTGCCCATTTGGTCCTCGAATGTTTCTGTCCCTGTTCCAAGTAATACAGTTATGGCTCAGCTCACTGATTTAGGTAATCTCGTTCTGATTCAAAATAATTACTCCAAAAATGTGTTGTGGCAAAGCTTTGATCATCTCACTGACACCCTTCTTCCATATGCCAAACTGGGTTTCAACAAAAGAACTGGTCAGAACTGGTTGTTGCAGTCATGGAAGACAGAAGATGATCCAGGAACAGGAAATATCTCATTCAGGTCCAACACATCTGGGAAAGATCAAGTTTTTCTGTACAATAAAAAAGTTCCATTGTGGCGAGGTGGGTTCTTCAATGGCGAAATATTTGTGGGTTTGCCATCTATGAAAAGAGAACTGTCATATGCTTTAAACCTTACTATCACAGACGATGATAATTCTGCCGGACTCACATATCACGCCGTTGATCCTACCGCCATCTTTCGGGTCGGAGTTGTTTCAACGGGCTACATGCAAACACATAAATGGGATCATGACACAAATGATTGGAAGCTATATGGGACACACCCAGCAAGCAATTGTGAAACCTACGGAACTTGTGGAGCCAACAGCAAGTGTGATTCTTTCAACTATGCTTACAACAAGTGTTTTTGCCTACCTGGGTTTGAACCTAGTAACCCTAATGAGTGGTACACGAACGATGAATCAGCTGGTTGTGTGAGGAAGAAAGGACCATCTTTGTGTGGGAATAATGGAGAAGGCTTCATTAAAGTAGACGGTGTGAAGATTCCAGATACTTCGATAGCCAATTTTCAGCAGGGTTTGAGAATGGAGGATTGTGAGCAAGAGTGCTTGAGAAATTGTACTTGTAATGGCTATGCAGCTTCAGATGTGAGAAATGGCGGAAGTGGGTGCTTGACTTGGCATGGAGATTTGCTGGACACAACGGTATTAAGTGAAGAAGGCCATGATTTATATGTTCGTGTTGATGCTGTTGAACTTGCAAATTATGCCAAGAAATCAAAAGGAACGCTGCCAAAGTCTGGGATGGTGGGAATTCCAGTAACTACTTTCGCTGTGATTGTTCTTCTAATTGCCTTGTGTGCTTATTGCTCTCGGACAAGGAAAATAACAGGTGGTGAAATAACTGAAGAACAAATGAAAATAGATTCTCCAATAGAAGAGCAGCACCATGATGAAAATAGAGCACAACCAAGCTTACCATGTTTCAGCATTAAAACCATAATGGTTGCAACAAATAAATTCTCCAATGAGAACCGATTGGGGCAAGGTGGATTTGGTTCTGTGTACAAGGGCTCATTATTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCTCAAGGTTCCAGACAAGGAACTCAAGAGTTCAAGAATGAAATTAAGGTGATTGGAAGATTGCAACACAGGAATCTTGTAAAGTTGCTTGGTTATTGCATTCATAAGAAAGAAAGGATGCTGATATATGAATACCTACCCAACAAAAGCTTGGACTTCTTTCTTTTTGATAGGGATAGAAGATCATCACTAGATTGGGATACACGTTTTCACATCATCATTGGAATTGCTCGAGGCATTCTCTATCTTCATCAAGATTCAAGGTTGAAAATAATCCATAGAGATCTTAAAGCTAGCAATGTCCTTTTAGACCTCGCAATGAATCCCAAAATTTCAGATTTTGGAATGGCTAGAATATTTGGAGAGGATCAAATCCAAGCAAATACAAAACGAATTGTTGGGACATATGGCTATATGTCTCCAGAATATGCAATGGAAGGACAATATTCAACAAAGTCTGATGTTTTCAGTTTTGGGATTCTGTTGATAGAGATTATTTGTGGAAAAAGAAATACAGATCACGATAAAGAAAGATCATCTGTAAATTTAATTGGACATGTATGGGAGATGTGGAGAGAAGAAAAATCCTTGGACATAGTGGATCCAATACTTGGTGAAGCATATCCAATTGACTTAGCCCGAAGATGTATACATATTGGGCTGTTGTGTGTGCAAGAAAATGCCTCCTATAGGCCTTCCATGTCAGAAGTAATCTACATGCTTGGCAATGAAGTGTCCCTCCCCTCACCTCGAAGACCTGCATTCCTATTCAATTCGAATGCAGAGCTTTCAGAATCTTCAACATCTAAAGATCCTTCTGTAAACGAAATTACTGGTACGACAATCAGTGCTAGATAA 2538 0.3995 MEVLRTKIAMRLIFIYLILFFNYCFLFCAAFSSDAITIGKPFSDNGELVISKGRKFALGFFSPGKSAFRFVGIWYYNLPKQTVVWVANRDNPINDSSGVLFLNPNNGNLVLRQNSTNLPIWSSNVSVPVPSNTVMAQLTDLGNLVLIQNNYSKNVLWQSFDHLTDTLLPYAKLGFNKRTGQNWLLQSWKTEDDPGTGNISFRSNTSGKDQVFLYNKKVPLWRGGFFNGEIFVGLPSMKRELSYALNLTITDDDNSAGLTYHAVDPTAIFRVGVVSTGYMQTHKWDHDTNDWKLYGTHPASNCETYGTCGANSKCDSFNYAYNKCFCLPGFEPSNPNEWYTNDESAGCVRKKGPSLCGNNGEGFIKVDGVKIPDTSIANFQQGLRMEDCEQECLRNCTCNGYAASDVRNGGSGCLTWHGDLLDTTVLSEEGHDLYVRVDAVELANYAKKSKGTLPKSGMVGIPVTTFAVIVLLIALCAYCSRTRKITGGEITEEQMKIDSPIEEQHHDENRAQPSLPCFSIKTIMVATNKFSNENRLGQGGFGSVYKGSLFNGQEIAVKRLSQGSRQGTQEFKNEIKVIGRLQHRNLVKLLGYCIHKKERMLIYEYLPNKSLDFFLFDRDRRSSLDWDTRFHIIIGIARGILYLHQDSRLKIIHRDLKASNVLLDLAMNPKISDFGMARIFGEDQIQANTKRIVGTYGYMSPEYAMEGQYSTKSDVFSFGILLIEIICGKRNTDHDKERSSVNLIGHVWEMWREEKSLDIVDPILGEAYPIDLARRCIHIGLLCVQENASYRPSMSEVIYMLGNEVSLPSPRRPAFLFNSNAELSESSTSKDPSVNEITGTTISAR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6016g00001 845 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Pral6016g00001 845 SMART serkin_6 530 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6016g00001 845 Pfam D-mannose binding lectin 82 189 IPR001480 -
Pral6016g00001 845 Pfam Domain of unknown function (DUF3403) 803 845 IPR021820 GO:0004674
Pral6016g00001 845 SMART blect_4 39 163 IPR001480 -
Pral6016g00001 845 ProSiteProfiles PAN/Apple domain profile. 356 438 IPR003609 -
Pral6016g00001 845 Gene3D Phosphorylase Kinase; domain 1 491 605 - -
Pral6016g00001 845 Pfam Protein tyrosine and serine/threonine kinase 533 798 IPR001245 GO:0004672|GO:0006468
Pral6016g00001 845 CDD PAN_AP_plant 353 437 - -
Pral6016g00001 845 Gene3D - 29 161 IPR036426 -
Pral6016g00001 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 494 605 - -
Pral6016g00001 845 SUPERFAMILY Protein kinase-like (PK-like) 514 817 IPR011009 -
Pral6016g00001 845 CDD B_lectin 41 162 IPR001480 -
Pral6016g00001 845 SMART ntp_6 358 437 IPR003609 -
Pral6016g00001 845 PIRSF SRK 5 845 IPR024171 GO:0004674
Pral6016g00001 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 160 - -
Pral6016g00001 845 Gene3D Transferase(Phosphotransferase) domain 1 606 807 - -
Pral6016g00001 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 194 IPR036426 -
Pral6016g00001 845 ProSiteProfiles Bulb-type lectin domain profile. 33 159 IPR001480 -
Pral6016g00001 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Pral6016g00001 845 Pfam PAN-like domain 356 423 IPR003609 -
Pral6016g00001 845 ProSiteProfiles Protein kinase domain profile. 530 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6016g00001 845 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 793 - -
Pral6016g00001 845 MobiDBLite consensus disorder prediction 824 845 - -
Pral6016g00001 845 CDD STKc_IRAK 536 801 - -
Pral6016g00001 845 FunFam Liguleless narrow1 606 808 - -
Pral6016g00001 845 Pfam S-locus glycoprotein domain 221 333 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6016g00001 Pral-Chr6016 5355 10087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6016g00001 446 832 Receptor kinase-like Gene Family AT4G05200 51.289 2.11e-129 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral6016g00001 PK_Tyr_Ser-Thr 4.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6016g00001 - - pcin:129286378 1212.98