Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6012g00003 ATGGTTGGAAGACCAGGGGCTATGAGCCAGCCCGATTCTTCCCTGAATTCTGCATCTTCATTATTAATTGCTTCACCACTATGTCATCCGAAGTTCAAGCCAGTTGAAACTGCTGAATATTCAAAGACGTTGGCCCAATTGTATTTCATGGACTGTCAAGGCCTGCAACTTGTATTTGACTCCAAATCAGGTGGTGCAGTTGATCATAGTGATGGAATTGATCGAAAGCCTACTGAAGCTTTTAATGCAAACTACGCAGAAGAGTATGCGTCATTCAAAAAGGCAAACCAGTCAGTATTGGATAATCAGAGTCACAAGATTGATCTTGATGACGATGATCTGGAAATTTTATGGAGCGAACTTATTTTGAAAGATAAAATTGGAACAGGTTCATTTGGAACTGTCCTTCGTGCAGATTGGCGTGGTTCTGATGTTGCTGTGAAAATTCTCAAGGTTCAAGGTTTTGATGCAGAACGATATGAAGAATTTAGAAAGGAGGTATCACTCATGAAACGTCTGCGGCATCCAAACATAGTTCTCTTCATGGGTGCAGTTTTTGAACAACCCAACTTGTCAATAGTGACAGAATATTTATCAAGAGGAAGCTTGTTTGAACTTCTGCGCATGCCAGATGCTAGATTAGTTCTCAGTGAGAAGCGTCGGTTGAGTATGGCTTATGATGTGGCAAGCGGAATGAATTATCTTCATCAAATGAGACCTCCTATTGTTCATAGAGATCTTAAGTCTCCAAATCTTTTGGTGGACGATACTTACACGGTCAAGGTATGTGATTTTGGTCTCTCACGTACCAAGGCAAACACATTTCTTTCATCTAAAACAGCCGCTGGGACGCCTGAGTGGATGGCACCAGAAGTGATTCGTGGTGAACCATCAAATGAAAAATGTGACATATTCAGCTTTGGTGTAATCCTGTGGGAACTAGTGACCCTGCAACAACCTTGGAGAAATTTAAATCCGTCTCAGGTTGTTGCAGCCGTTGGTTTCATGGACAGAAGACTAGAGATGCCGACCTATGTGAATCCCAAAGTGGTTGCCTTGATTCAACTCTGCTGGGCCGTTGAACCCTCGAGCCGCCCCTCTTTCTCCTATATTATGAACTTTCTGCAGCAAATGATTGCCGATACTCAAGGGTGA 1155 0.4268 MVGRPGAMSQPDSSLNSASSLLIASPLCHPKFKPVETAEYSKTLAQLYFMDCQGLQLVFDSKSGGAVDHSDGIDRKPTEAFNANYAEEYASFKKANQSVLDNQSHKIDLDDDDLEILWSELILKDKIGTGSFGTVLRADWRGSDVAVKILKVQGFDAERYEEFRKEVSLMKRLRHPNIVLFMGAVFEQPNLSIVTEYLSRGSLFELLRMPDARLVLSEKRRLSMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDTYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGEPSNEKCDIFSFGVILWELVTLQQPWRNLNPSQVVAAVGFMDRRLEMPTYVNPKVVALIQLCWAVEPSSRPSFSYIMNFLQQMIADTQG 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6012g00003 384 PRINTS Tyrosine kinase catalytic domain signature 283 293 IPR001245 GO:0004672|GO:0006468
Pral6012g00003 384 PRINTS Tyrosine kinase catalytic domain signature 346 368 IPR001245 GO:0004672|GO:0006468
Pral6012g00003 384 PRINTS Tyrosine kinase catalytic domain signature 195 208 IPR001245 GO:0004672|GO:0006468
Pral6012g00003 384 PRINTS Tyrosine kinase catalytic domain signature 236 254 IPR001245 GO:0004672|GO:0006468
Pral6012g00003 384 PRINTS Tyrosine kinase catalytic domain signature 302 324 IPR001245 GO:0004672|GO:0006468
Pral6012g00003 384 ProSiteProfiles Protein kinase domain profile. 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6012g00003 384 Pfam Protein tyrosine and serine/threonine kinase 122 375 IPR001245 GO:0004672|GO:0006468
Pral6012g00003 384 SUPERFAMILY Protein kinase-like (PK-like) 105 375 IPR011009 -
Pral6012g00003 384 CDD STKc_MAP3K-like 127 375 - -
Pral6012g00003 384 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 80 378 - -
Pral6012g00003 384 Gene3D Transferase(Phosphotransferase) domain 1 200 383 - -
Pral6012g00003 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Pral6012g00003 384 ProSitePatterns Protein kinases ATP-binding region signature. 127 148 IPR017441 GO:0005524
Pral6012g00003 384 Gene3D Phosphorylase Kinase; domain 1 114 199 - -
Pral6012g00003 384 SMART serkin_6 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6012g00003 384 FunFam Serine/threonine-protein kinase isoform 1 111 199 - -
Pral6012g00003 384 FunFam Serine/threonine-protein kinase CTR1 200 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6012g00003 Pral-Chr6012 22480 31975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6012g00003 1 379 MAP Kinase Kinase Kinase AT5G03730 58.231 7.41e-149 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral6012g00003 PK_Tyr_Ser-Thr 2.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6012g00003 K14510 - gmx:100807496 578.17