Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6011g00005 ATGAATGATGGAGATGTTGAGCTTTCAGATGGTTTCTTATTGTCGAATCCAGAATCGTCGAGCAATGTTCAGTCTTCAACATCCATGAATAAAATCAATGAATTCTTGAGGAACACCAGAACATGCACCCATACTCACACTTGCAACCCTCCTGGCCCAGATGCAGCACATACCCACACATGTTACCACACACACACCCAAGTCATTGCGTCTGAAGAAGATGATCATACAGATGATAAGGAGCATACCAACACAAAACGAAAACGGCCTTCGGGTAATAGAGAAGCTGTTCGAAAGTATAGGGAGAAGAAGAAGGCACAGACTGCTTACCTAGAGGAGGAAGTTAAGAAATTGCGTCTGCAGAATCAGCAATTAGTTAGGAAGCTACAAGGGCATGCACATCTTGAAGCTGAGGTTTTGAGGTTGAGGAGCATCCTGGTTGACCTCAAGGGAAAAATTGACAATGAGTTGGGTGTTTTCCCCTATAAAAAGCAGTGTAATGGCTCTTCCTCAATCTTTAAAGAGGGGCACACCAACATGCTGCCCACAGACCGCGGGACTGATCTTCAGTGTCAGACCAATTTCCAATGCTTTGATCAACAGGCAGGATTATCATCTCAGGTTGGTACCTGTGGAAATGAAAATTTTATGATTCCATGTGAAGGGAACTGTGAACCTCTAGCCGTGAATTGTCAAGGTAACACGAATAACATATCAAATACTGAGGGGCAAGTTGTGGACTCAGTGGATAACTTGATGTCATCTGCATCTCAAGATAAGAAAGTGATGCATCTCTAA 798 0.4336 MNDGDVELSDGFLLSNPESSSNVQSSTSMNKINEFLRNTRTCTHTHTCNPPGPDAAHTHTCYHTHTQVIASEEDDHTDDKEHTNTKRKRPSGNREAVRKYREKKKAQTAYLEEEVKKLRLQNQQLVRKLQGHAHLEAEVLRLRSILVDLKGKIDNELGVFPYKKQCNGSSSIFKEGHTNMLPTDRGTDLQCQTNFQCFDQQAGLSSQVGTCGNENFMIPCEGNCEPLAVNCQGNTNNISNTEGQVVDSVDNLMSSASQDKKVMHL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6011g00005 265 CDD bZIP 86 130 - -
Pral6011g00005 265 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 83 149 IPR004827 GO:0003700|GO:0006355
Pral6011g00005 265 Pfam Basic region leucine zipper 86 138 IPR004827 GO:0003700|GO:0006355
Pral6011g00005 265 Gene3D - 71 150 - -
Pral6011g00005 265 SMART brlzneu 81 148 IPR004827 GO:0003700|GO:0006355
Pral6011g00005 265 MobiDBLite consensus disorder prediction 13 28 - -
Pral6011g00005 265 MobiDBLite consensus disorder prediction 1 28 - -
Pral6011g00005 265 Coils Coil 101 128 - -
Pral6011g00005 265 SUPERFAMILY Leucine zipper domain 86 132 IPR046347 GO:0003700|GO:0006355
Pral6011g00005 265 PANTHER CCAAT/ENHANCER BINDING PROTEIN 16 161 IPR031106 GO:0003700|GO:0006351
Pral6011g00005 265 MobiDBLite consensus disorder prediction 68 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6011g00005 Pral-Chr6011 61151 63785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6011g00005 1 221 bZIP Transcription Factor Family AT4G35040 43.172 1.71e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral6011g00005 bZIP_2 4.2e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6011g00005 K25785 - vvi:100255414 302.367