Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6010g00007 ATGTTTTCGAGACTAATACATCCTCACGAAGGGACATTTGGTCAAGAAAATATGCAGGGTGGATTGAACCACAGTCACCTTGGAGACCCATGTCTTGTCCTGACTGCTGATCCCAAACCTCGACTTCGTTGGACTGCGGACCTTCACGAGCGATTTGTTGATGCCGTCACTCAGCTTGGAGGTGCCAGTAAAGCTACACCAAAAGCAATCATGAGGACCATGAATGTCAAAGGTTTGACTCTTTATCATTTAAAGAGTCATCTTCAGAAATACAGACTTGGCAAGCAATCAGGAAAAGATAGTGGAGAGGGATGCAAAGATGGAATATCTGCTTCATATCTTTTAGAGAGCCCTGGTGACTCTGCTCCAAAGCTGCCAGCTTCTGATGCAAATGAAGGTCACGAAGTCAAGGAAGCATTAAGGGCACAAATGGAAGTGCAAAGCAAACTGCACTTGCTAGTCGAGGCAGAGAAGCACTTGCAGATACGCCAGGATGCCGAGAGAAAATATATGGCCATGCTTGAGAGAGCTTGTAAGATGTTAGCTGATCAATTTATTGGTGCTACGGTAATAGACACGGACAACCAGAAATTTCAAGGCATGGGAAATAAAACATCAAAATCTTCTATGCTTGATCCCCTGGGCTTTTGCTCCTTACCATCAACTGAGGCGACTGGAGTGAATGTTCCGGAAGCACAGCCTAGTTTCCAGCAGCAGCGGGGTGACTGTTCCACTGAAAGCTGCTTGACATCACTTGAAAGCCTAGGAGGGTTGACTCTGGAAGGATCTCCAGGTGGAGCTAAAAAGAGGATGCTGAGCTTGGACTCAATGGTGGCGCCTCTGATCTGGAGTGAAGCCAATATGAGAACCCAAGGCATTCATCTAGCCCAAGTTAATCCTCATGGAATAACTAGGTATGGCATGTAG 927 0.4628 MFSRLIHPHEGTFGQENMQGGLNHSHLGDPCLVLTADPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSGEGCKDGISASYLLESPGDSAPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERKYMAMLERACKMLADQFIGATVIDTDNQKFQGMGNKTSKSSMLDPLGFCSLPSTEATGVNVPEAQPSFQQQRGDCSTESCLTSLESLGGLTLEGSPGGAKKRMLSLDSMVAPLIWSEANMRTQGIHLAQVNPHGITRYGM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6010g00007 308 Gene3D - 38 96 - -
Pral6010g00007 308 Pfam MYB-CC type transfactor, LHEQLE motif 135 180 IPR025756 -
Pral6010g00007 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 254 IPR044848 GO:0003700
Pral6010g00007 308 FunFam Myb family transcription factor 38 96 - -
Pral6010g00007 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Pral6010g00007 308 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Pral6010g00007 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Pral6010g00007 308 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6010g00007 Pral-Chr6010 28836 33134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6010g00007 17 252 G2-like Transcription Factor Family AT3G24120 46.185 1.43e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral6010g00007 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6010g00007 - - gmx:100779871 478.789