Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral600g00011 ATGGAAAGAATGTTCCCTCCAAAGAAGCCCTCGACTATGAATTCCCATGACAGACCCATGTGTATTCAAGGCGACTCTGGCCTCGTCCTCACCACCGACCCTAAGCCTCGCCTTCGTTGGACCGTCGAACTCCATGAACGCTTCGTCGACGCCGTCACCCAGCTCGGCGGCCCTGATAGCCACCCCAAAACCATTATGAGGGTTATGGGTGTGAAGGGGCTTACGCTTTACCATCTCAAGAGCCACCTTCAGAAATTTAGGCTTGGGAAGCAACCCCAAGAATTCAATGATCATTCCATTAAGGATAGTATGAGAGCTTCGGCTTTAGAGCTTCAACGAAACACTGCTTCCCCATCGGCCATGATTGGTCGCAACATGAATGAGATGCAAATGGAGGTGCAGAGGAGACTGCATGAACAGCTTGAGGTCCAAAAACATCTTCAGCTAAGAATTGAAGCTCAAGGAAAGTACATGCAGAGCATATTGGAGAAGGCTTATCAAACACTTGCAGGTGAAAACATGGCTGCCACCAATAACTTAAAGGGAAATATCATCATTGGAGCAGCTCAAGCCATGCCTGAAATAGGGGCTGGAGGAGTCAGAAAAGATTTTAGTTCAACTCTTAATTTTCCCTTTCAAGAACTCAACATCTATGGTGGCGGTAGCGTTGGTAGTGACCAACTTGATCATCATCTTCACCATATGGAGAGGCCACAGCTCGAGGGGTTGATGATACCAAATAACAATAACAATAACAACAATGAAAATTTGAGTCTGGGCAAGAAGAGGCCAAATCCTTATAACAGTACTGCTACAGGGAAGAGTCCTTTGATTTGGAATGATGATCTTCGGCTTCATCAAGATTTAGGGACTGCTTCATCATGCCTCGGAGGACCTCAAGATGATCCTTTCAAAGGTTTTGATCAACAACTTCATATCGCACCACCATCGTTGGATCATAGAGCAGGTGAAATGGATCCTACCATGTCAGAAATTTATGACACAAAGCCTGTGCTACAAGGAGAAGCTGTGTGTGATAAGTTTTCAGAGGCTTCAGTGAAGCTTGAAAGGCCATCGCCAAAAAGGACAGCAACCACCACTCCTCTTCAAGGAGAAAGGATGAGTCCCATGATTAATAGTGGTACTATGGCACAAGGAAGAAGCTCACCATTTGGGTGA 1179 0.4589 MERMFPPKKPSTMNSHDRPMCIQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDSHPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHXEFNDHSIKDSMRASALELQRNTASPSAMIGRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMAATNNLKGNIIIGAAQAMPEIGAGGVRKDFSSTLNFPFQELNIYGGGSVGSDQLDHHLHHMERPQLEGLMIPNNNNNNNNENLSLGKKRPNPYNSTATGKSPLIWNDDLRLHQDLGTASSCLGGPQDDPFKGFDQQLHIAPPSLDHRAGEMDPTMSEIYDTKPVLQGEAVCDKFSEASVKLERPSPKRTATTTPLQGERMSPMINSGTMAQGRSSPFG 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral600g00011 393 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 91 IPR017930 -
Pral600g00011 393 FunFam Two-component response regulator 31 92 - -
Pral600g00011 393 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 89 IPR006447 GO:0003677
Pral600g00011 393 MobiDBLite consensus disorder prediction 243 275 - -
Pral600g00011 393 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 210 IPR044848 GO:0003700
Pral600g00011 393 MobiDBLite consensus disorder prediction 355 393 - -
Pral600g00011 393 MobiDBLite consensus disorder prediction 360 393 - -
Pral600g00011 393 Gene3D - 34 91 - -
Pral600g00011 393 MobiDBLite consensus disorder prediction 244 275 - -
Pral600g00011 393 Pfam MYB-CC type transfactor, LHEQLE motif 130 169 IPR025756 -
Pral600g00011 393 SUPERFAMILY Homeodomain-like 34 89 IPR009057 -
Pral600g00011 393 MobiDBLite consensus disorder prediction 1 25 - -
Pral600g00011 393 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral600g00011 Pral-Chr600 87119 90063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral600g00011 4 393 G2-like Transcription Factor Family AT1G79430 54.074 6.89e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral600g00011 Myb_DNA-binding 1.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral600g00011 - - pcin:129315830 704.516