Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral600g00010 ATGACTCTGGCTTTCGCAGCATTGACCTTACGCTTATCACCAATGGGATCTTGGAAGCTCATCCCTCGCTGTTCACTCTTGCTTTCCATGCAGACCACCACTCCTTCCTTCGCTCGCCAGATGAGCATGGATGCAAAAAGTGTTGCTTCTCAGCTTAATAGTTCTGGCCTGTTGCGGACTCAGGGCCTTGTTGGAGGCAAATGGAGTGATGCCTACGATGGCAAAACCATAAAGGTTTATAATCCAGCTACTGGTGAATCTATAGCAGATATTGCATGCATGGGTGGAAGAGAGACGAACGATGCGATATCCTCAGCCTATGATGCATATCAATCTTGGAGCAAAACCACTGCTGCTGAGAGGGGTAAACTTCTGAGAAAATGGTATGATTTGCTAATGGCACACAAGGAAGAGCTTGCAAAACTTATAACCTTAGAGCAAGGAAAGCCTCTTAAAGAATCTATTGCTGAGGTAAATTATGGGGCTAGTTTTATTGAGTTTTCAGCAGAGGAGGCAAGGCGTGTATATGGAGATATAATTCCTGCACCACTATCTGATCGACGAATATTTGTTTTAAAACAGCCTGTAGGGGTTGTTGGTGCTATCACACCTTGGAACTTTCCTTTGGCTATGATTACCCGAAAGGTCGGTCCAGCCCTTGCATGTGGCTGTACAGTGGTCGTTAAGCCCTCTGAACTTACTCCTCTCACAGCTTTGGCTTCAGCAGAGCTTGCGATTCAAGCTGGAATACCAGCGGGTGTTGTGAATGTAGTTATGGGAAATGCTCCTGAAATTGGGGATGCTATACTTGCAAGTCCGCAGGTAAGGAAAATCACATTTACCGGCTCAACTGCAGTTGGAAAAAAGTTGATGGCAGGTGCTGCTGGAACAGTTAAAAGAGTATCTCTGGAACTTGGTGGCAATGCCCCTTGCATAATATTTGATGATGCTGATCTTGATGTGGCAGTAAAAGGAACTGTTGCAGCAAAGTTCCGTGCTAGTGGACAAACATGTGTATGTGCAAATAGAATTCTAGTGCAAGAAGGTATCTATGAGAAATTTGCAACTCTTCTCCTTGATGCTGTTAAGAATATGAAAGTTGGGGACGGTTTTAGTGAAGGTGTGGTTCAGGGACCTCTAATCAATGAAGCTGCTGTGCAAAAGGTTGAATCTTTACTTCATGATGCCATCTCCAAGGGGGCAAAAGTAATTCAAGGGGGCAAAAGACACAGCCTTGGATTAACTTTTTATGAACCTACAGTCGTCACTGATGTCAACAATGAGATGCGCATATCAAGAGAGGAAGTATTTGGACCAGTTGCTCCTCTTCTGAGATTTAAAACTGAGGAGGAGGCCATCAAAATCGCCAACGACACTAATGCAGGGTTGGGTTCATATATCTTTACAAACGATGTTCAACGCTCTTGGCGTGTTGCTGAGGCTCTTGAATACGGACTCGTCGGTGTAAATGAAGGAATAATTTCAACAGAGGTTGCTCCTTTTGGCGGTGTTAAACAGTCTGGCCTTGGAAGAGAAGGCTCCAAATATGGCATGGATGAATATTTGGAGATCAAATATGTCTGCTTGGGAAACATGAACAAAGACTGA 1608 0.4428 MTLAFAALTLRLSPMGSWKLIPRCSLLLSMQTTTPSFARQMSMDAKSVASQLNSSGLLRTQGLVGGKWSDAYDGKTIKVYNPATGESIADIACMGGRETNDAISSAYDAYQSWSKTTAAERGKLLRKWYDLLMAHKEELAKLITLEQGKPLKESIAEVNYGASFIEFSAEEARRVYGDIIPAPLSDRRIFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVVKPSELTPLTALASAELAIQAGIPAGVVNVVMGNAPEIGDAILASPQVRKITFTGSTAVGKKLMAGAAGTVKRVSLELGGNAPCIIFDDADLDVAVKGTVAAKFRASGQTCVCANRILVQEGIYEKFATLLLDAVKNMKVGDGFSEGVVQGPLINEAAVQKVESLLHDAISKGAKVIQGGKRHSLGLTFYEPTVVTDVNNEMRISREEVFGPVAPLLRFKTEEEAIKIANDTNAGLGSYIFTNDVQRSWRVAEALEYGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGNMNKD 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral600g00010 535 SUPERFAMILY ALDH-like 56 533 IPR016161 GO:0016491
Pral600g00010 535 NCBIfam succinate-semialdehyde dehydrogenase 79 525 IPR010102 GO:0009013|GO:0009450
Pral600g00010 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 303 310 IPR029510 GO:0016491
Pral600g00010 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 496 IPR016163 GO:0016620
Pral600g00010 535 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 53 532 - -
Pral600g00010 535 FunFam Aldehyde dehydrogenase, putative 499 525 - -
Pral600g00010 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 74 521 IPR016162 GO:0016491
Pral600g00010 535 CDD ALDH_F5_SSADH_GabD 79 529 - -
Pral600g00010 535 FunFam Succinate-semialdehyde dehydrogenase I 74 317 - -
Pral600g00010 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 331 342 IPR016160 GO:0016491
Pral600g00010 535 FunFam Succinate-semialdehyde dehydrogenase I 307 496 - -
Pral600g00010 535 Pfam Aldehyde dehydrogenase family 70 527 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral600g00010 Pral-Chr600 63469 80173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral600g00010 24 534 Aldehyde Dehydrogenase Gene Family AT1G79440 78.210 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral600g00010 K17761 - gmx:100808318 908.286