Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral600g00010 | ATGACTCTGGCTTTCGCAGCATTGACCTTACGCTTATCACCAATGGGATCTTGGAAGCTCATCCCTCGCTGTTCACTCTTGCTTTCCATGCAGACCACCACTCCTTCCTTCGCTCGCCAGATGAGCATGGATGCAAAAAGTGTTGCTTCTCAGCTTAATAGTTCTGGCCTGTTGCGGACTCAGGGCCTTGTTGGAGGCAAATGGAGTGATGCCTACGATGGCAAAACCATAAAGGTTTATAATCCAGCTACTGGTGAATCTATAGCAGATATTGCATGCATGGGTGGAAGAGAGACGAACGATGCGATATCCTCAGCCTATGATGCATATCAATCTTGGAGCAAAACCACTGCTGCTGAGAGGGGTAAACTTCTGAGAAAATGGTATGATTTGCTAATGGCACACAAGGAAGAGCTTGCAAAACTTATAACCTTAGAGCAAGGAAAGCCTCTTAAAGAATCTATTGCTGAGGTAAATTATGGGGCTAGTTTTATTGAGTTTTCAGCAGAGGAGGCAAGGCGTGTATATGGAGATATAATTCCTGCACCACTATCTGATCGACGAATATTTGTTTTAAAACAGCCTGTAGGGGTTGTTGGTGCTATCACACCTTGGAACTTTCCTTTGGCTATGATTACCCGAAAGGTCGGTCCAGCCCTTGCATGTGGCTGTACAGTGGTCGTTAAGCCCTCTGAACTTACTCCTCTCACAGCTTTGGCTTCAGCAGAGCTTGCGATTCAAGCTGGAATACCAGCGGGTGTTGTGAATGTAGTTATGGGAAATGCTCCTGAAATTGGGGATGCTATACTTGCAAGTCCGCAGGTAAGGAAAATCACATTTACCGGCTCAACTGCAGTTGGAAAAAAGTTGATGGCAGGTGCTGCTGGAACAGTTAAAAGAGTATCTCTGGAACTTGGTGGCAATGCCCCTTGCATAATATTTGATGATGCTGATCTTGATGTGGCAGTAAAAGGAACTGTTGCAGCAAAGTTCCGTGCTAGTGGACAAACATGTGTATGTGCAAATAGAATTCTAGTGCAAGAAGGTATCTATGAGAAATTTGCAACTCTTCTCCTTGATGCTGTTAAGAATATGAAAGTTGGGGACGGTTTTAGTGAAGGTGTGGTTCAGGGACCTCTAATCAATGAAGCTGCTGTGCAAAAGGTTGAATCTTTACTTCATGATGCCATCTCCAAGGGGGCAAAAGTAATTCAAGGGGGCAAAAGACACAGCCTTGGATTAACTTTTTATGAACCTACAGTCGTCACTGATGTCAACAATGAGATGCGCATATCAAGAGAGGAAGTATTTGGACCAGTTGCTCCTCTTCTGAGATTTAAAACTGAGGAGGAGGCCATCAAAATCGCCAACGACACTAATGCAGGGTTGGGTTCATATATCTTTACAAACGATGTTCAACGCTCTTGGCGTGTTGCTGAGGCTCTTGAATACGGACTCGTCGGTGTAAATGAAGGAATAATTTCAACAGAGGTTGCTCCTTTTGGCGGTGTTAAACAGTCTGGCCTTGGAAGAGAAGGCTCCAAATATGGCATGGATGAATATTTGGAGATCAAATATGTCTGCTTGGGAAACATGAACAAAGACTGA | 1608 | 0.4428 | MTLAFAALTLRLSPMGSWKLIPRCSLLLSMQTTTPSFARQMSMDAKSVASQLNSSGLLRTQGLVGGKWSDAYDGKTIKVYNPATGESIADIACMGGRETNDAISSAYDAYQSWSKTTAAERGKLLRKWYDLLMAHKEELAKLITLEQGKPLKESIAEVNYGASFIEFSAEEARRVYGDIIPAPLSDRRIFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVVKPSELTPLTALASAELAIQAGIPAGVVNVVMGNAPEIGDAILASPQVRKITFTGSTAVGKKLMAGAAGTVKRVSLELGGNAPCIIFDDADLDVAVKGTVAAKFRASGQTCVCANRILVQEGIYEKFATLLLDAVKNMKVGDGFSEGVVQGPLINEAAVQKVESLLHDAISKGAKVIQGGKRHSLGLTFYEPTVVTDVNNEMRISREEVFGPVAPLLRFKTEEEAIKIANDTNAGLGSYIFTNDVQRSWRVAEALEYGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGNMNKD | 535 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral600g00010 | 535 | SUPERFAMILY | ALDH-like | 56 | 533 | IPR016161 | GO:0016491 | |
Pral600g00010 | 535 | NCBIfam | succinate-semialdehyde dehydrogenase | 79 | 525 | IPR010102 | GO:0009013|GO:0009450 | |
Pral600g00010 | 535 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 303 | 310 | IPR029510 | GO:0016491 | |
Pral600g00010 | 535 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 307 | 496 | IPR016163 | GO:0016620 | |
Pral600g00010 | 535 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 53 | 532 | - | - | |
Pral600g00010 | 535 | FunFam | Aldehyde dehydrogenase, putative | 499 | 525 | - | - | |
Pral600g00010 | 535 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 74 | 521 | IPR016162 | GO:0016491 | |
Pral600g00010 | 535 | CDD | ALDH_F5_SSADH_GabD | 79 | 529 | - | - | |
Pral600g00010 | 535 | FunFam | Succinate-semialdehyde dehydrogenase I | 74 | 317 | - | - | |
Pral600g00010 | 535 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 331 | 342 | IPR016160 | GO:0016491 | |
Pral600g00010 | 535 | FunFam | Succinate-semialdehyde dehydrogenase I | 307 | 496 | - | - | |
Pral600g00010 | 535 | Pfam | Aldehyde dehydrogenase family | 70 | 527 | IPR015590 | GO:0016491 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral600g00010 | Pral-Chr600 | 63469 | 80173 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral600g00010 | 24 | 534 | Aldehyde Dehydrogenase Gene Family | AT1G79440 | 78.210 | 0.0 | 818 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral600g00010 | K17761 | - | gmx:100808318 | 908.286 |