Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6008g00002 ATGCCAAATATTGGTTACGGGTCAGACAAGAAGACCCGTCACCATCTCCCTAATGGATTTAAGAAATTTGTTGTGCACAATGTGAGTGAGCTGGAACTCTTGATGATGCACAACAGGACTTACTGTGCTGAGATAGCGCACAACGTATCAACCCGGAAGCGAAAGGAGATTGTTGAGAGGGCAGCACAGTTGGATGTTGTTGTTACCAACAGAACAGCCAGGTTGCGTAGCCAAGAGGACGAGTGA 246 0.4715 MPNIGYGSDKKTRHHLPNGFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNRTARLRSQEDE 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6008g00002 81 CDD Ribosomal_L32_L32e 1 70 IPR001515 GO:0003735|GO:0005840|GO:0006412
Pral6008g00002 81 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 81 IPR001515 GO:0003735|GO:0005840|GO:0006412
Pral6008g00002 81 SMART Ribosomal_L32e_2 1 70 IPR001515 GO:0003735|GO:0005840|GO:0006412
Pral6008g00002 81 SUPERFAMILY Ribosomal protein L32e 1 79 IPR036351 -
Pral6008g00002 81 Pfam Ribosomal protein L32 1 70 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6008g00002 Pral-Chr6008 51752 56875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6008g00002 1 81 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 91.358 1.71e-53 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6008g00002 K02912 - zju:107430871 160.229