Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6005g00003 ATGTCTTCCCCAGTCATCTCTCTCTTTTTCATCCAAATCCTTCTCGTTCTTTGCTCAGCTTCAGCTACTGAATTCATCTACAACACCAACTTCAGCTCTACCAACATCCTTCTCTCCGGCAATGCTTCCATTGATTCTTCCATTCTCACCCTCACCGATCGTCCATCCTTCTCTGTAGGTCGAGCTTTTTACCCTTTTAAAATACCCACAAAACCTTATATTTCTTCTTCTCCTTTACCATTCTCAACCTCCTTCATCTTCTCTATTGCTCCTTTTAAACATGCCCTTGCTGGACATGGATTCGTCTTCATTCTCTCTCCTTTCACGGGCACAACGGGAGTTAGCTCTGCCCAGCATTTGGGTCTCTTCAATTTCACCAATGACGGTAATCCCGACAACCATGTTTTTGGCGTTGAATTTGATGTGTTTAAGAACCAAGAGTTTAATGATATCAATGATAATCATGTGGGTGTGGATATAAATTCGCTCACTTCTTTTAGTTCGCATGCTGCGGGTTCTTGGGTTGGGAAAGATGATAGGGTGTTTGAGGATTTGAAACTTAATGATGGGGATAATTATCAAGTGTGGATTGATTATGAGGATTCTAGAATAAATGTAACTATGGCTCGTGTAGGACGAAAGAGGCCTCGGAGACCTTTGATCAGTGAGATTGTTAATCTTTCCTCGGTTCTTTTGGATGAAATGCATGTGGGATTTTGTGGGGCAACAGGGCAATTGGTGGAGAGTCATAAAATTTTGAGTTGGAGCTTTAGTAATACCAATTTTTCAATTGGGGATGCTTTAGTGACTTCAAATTTGCCTTCATTTTTACTTCCTAAAAGATCAGTTACAAGGTCAAAAAGTTTTATTATTGGAGTCAGTATCGGCGTCTTCTTTCTCACTGGCAGTGCCAGTGTAATATTGGTACATTTTCTTAGAAGGAAAACTAGCAACAGAGATGAGGAAGACACTGAGGATTGGGAATTAGAGTATTGGCCACACCAAATACGCTATGACGATATTTATGCTGCCACTAATGGATTTTCAGACCAAAATGTGATTGGGTTCGGAGGGAATGGAAAAGTTTATAGAGGGGTTTTACAAAATGTAGAAGTTGCAGTGAAAAAAATCCCTTATGAGAGTGAGAAAGGCATGAGGGAATTTTTGTCTGAAATCTCAAGTTTAGGAAGATTGAAGCACAGGAATGTGGTGCCATTGAGAGGTTGGTGTAAGAAAGAGAGAGGAAGTTTGATTCTAGTCTATGACTATATGAGCAACGGAAGTTTAGACAAAAGGATATTTGATGCTGGTGAGAACAAAATTTTGACATGGGACGAAAGAATCAAGGTGTTGAAGGACGTAGCTCGTGGATTATTGTATCTGCATGAAGGCTGGGAAGTTTGCGTCTTGCATAGAGACATCAAAGCAAGCAATGTATTGCTCGATAAGGATATGAATGCGAGGTTGGGTGATTTCGGATTAGCTCGACTTTGCCATCATGGGCAGCTGACTAATACCACACAAGTGATTGGAACAGTTGGATACATGGCACCTGAACTAGTTCAAAGAGGGAAAGCCTCAGCTCATACTGATGTATTCAGTTTTGGTGTGTTGATTTTAGAAGTGTTATGTGGGAGAAGACCAAGTGAACAAGACAAGCGAGGTTTGGTTGCTTGGGTTTTGAGTCTAATGGAGAGAGGAGAATTATATGATGCTCTTGATGAACATTTAAAGTGGACGAGAGATCATGACAGTGATGAAGCTGAGAGGGTTCTTCATCTTGGTTTGCTGTGCACACTGCCTGAGCCTGGTGCTAGGCCTACTATGAGACAGGTTATGAAGGTGTTGGAAGAAGAGAGGATGGATCTGAGCTTGATTGAAAAATTAAATTCTGCTCTCATTTCTGCAGTAAAAGCTGGAAGTTTCAGTTACGGCATTCATCACCCTACAGTTGAGGAGATTTCCCGGCCTAATTTATCTTTCACAGAGTTCTGTGATTTGGAAAGTGAGAATTATGGAGTGGGAAAAAGGTGA 2034 0.411 MSSPVISLFFIQILLVLCSASATEFIYNTNFSSTNILLSGNASIDSSILTLTDRPSFSVGRAFYPFKIPTKPYISSSPLPFSTSFIFSIAPFKHALAGHGFVFILSPFTGTTGVSSAQHLGLFNFTNDGNPDNHVFGVEFDVFKNQEFNDINDNHVGVDINSLTSFSSHAAGSWVGKDDRVFEDLKLNDGDNYQVWIDYEDSRINVTMARVGRKRPRRPLISEIVNLSSVLLDEMHVGFCGATGQLVESHKILSWSFSNTNFSIGDALVTSNLPSFLLPKRSVTRSKSFIIGVSIGVFFLTGSASVILVHFLRRKTSNRDEEDTEDWELEYWPHQIRYDDIYAATNGFSDQNVIGFGGNGKVYRGVLQNVEVAVKKIPYESEKGMREFLSEISSLGRLKHRNVVPLRGWCKKERGSLILVYDYMSNGSLDKRIFDAGENKILTWDERIKVLKDVARGLLYLHEGWEVCVLHRDIKASNVLLDKDMNARLGDFGLARLCHHGQLTNTTQVIGTVGYMAPELVQRGKASAHTDVFSFGVLILEVLCGRRPSEQDKRGLVAWVLSLMERGELYDALDEHLKWTRDHDSDEAERVLHLGLLCTLPEPGARPTMRQVMKVLEEERMDLSLIEKLNSALISAVKAGSFSYGIHHPTVEEISRPNLSFTEFCDLESENYGVGKR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6005g00003 677 SUPERFAMILY Protein kinase-like (PK-like) 325 617 IPR011009 -
Pral6005g00003 677 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 309 423 - -
Pral6005g00003 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 262 IPR013320 -
Pral6005g00003 677 CDD lectin_legume_LecRK_Arcelin_ConA 23 260 IPR001220 GO:0030246
Pral6005g00003 677 SMART serkin_6 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6005g00003 677 Gene3D Transferase(Phosphotransferase) domain 1 424 632 - -
Pral6005g00003 677 ProSiteProfiles Protein kinase domain profile. 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6005g00003 677 FunFam L-type lectin-domain containing receptor kinase S.4 424 628 - -
Pral6005g00003 677 Pfam Protein kinase domain 349 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6005g00003 677 FunFam L-type lectin-domain containing receptor kinase S.4 21 265 - -
Pral6005g00003 677 CDD STKc_IRAK 354 618 - -
Pral6005g00003 677 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Pral6005g00003 677 PANTHER - 39 619 - -
Pral6005g00003 677 Pfam Legume lectin domain 23 261 IPR001220 GO:0030246
Pral6005g00003 677 Gene3D - 21 269 - -
Pral6005g00003 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Pral6005g00003 677 Gene3D Phosphorylase Kinase; domain 1 310 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6005g00003 Pral-Chr6005 21658 24140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6005g00003 21 567 Receptor kinase-like Gene Family AT4G04960 59.420 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral6005g00003 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6005g00003 - - gmx:100807059 944.88