Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6001g00001 ATGAGAAGATCCACTCTTTATTCCATCCCCTTCCTTCTTTCCTTCCTCTGGTACAGTTCATCTCTGTCCAGTGCCTACTCTGACCTCGATGCTCTGCTCAAGCTCAAAGCTTCCCTTAAGGGGCCCAAGGCTTCACCTTTTGCCATGGAGGATTGGAAACCCTCTCCTTCTCTATTTGCTCACTGCAACTTCTCTGGAGTTCACTGTGACGACAATTTGAGGGTTGTCTCTTTGAATATCTCGTTCCATCCCCTGTTTGGATCGATTCCGCCGGAGATTGGCCTACTTGACAAGCTTGTCTCTCTCACGCTTTCACACAACCTCACAGGCGAGCTCCCGAAAGAGCTCGCCAACCTTGCTTCCCTGCAAGTTCTTAATATTTCACACAACGCCTTTACCGGAGAATTCCCTGGCGAAATCACTCTCAACATGACGGAGATTGAGGTTCTAGACGTTTATGATAACAGCTTCAACGGTTCGTTACCGTTGGAAGTTGTGAGATTGAAGAAACTGAAGCAGCTCTGGCTTTCCGGGAACTACTTTTCCGGTGAGATACCAGAGAGTTATTCGGAGTTCGAGAGCTTGGAAATTCTGAAACTGAACGAGAACAGCCTCAGAGGAAAAATCCCGGCGAGTTTAGCAAAATTGAAGAAGCTCAGGGAGTTGTATTTGGGTTATAGTAATGTGTACCAAGGAGGTATCCCCCCGGAGCTAGCCACGATGGGCACGCTTCAACTGATTGATTTAGGAAGCTGTAATCTATCCGGCGAGATTCCACCGATCTTGGGCAATTTGAAGAACTTACACTCTCTCTTCCTTCAAGTGAATAACCTCACCGGAGAAATCCCACCTGAACTCTCCGGTATGACTAGCCTCAAGTCGCTGGATTTATCGATCAACAACCTCACCGGAGAGATACCCTCCAGTTTTTCCAGACTAACGAACCTAACTTTGATCAATTTGTATGAAAACAAGCTTCTTGGTCCTATCCCGCCATTCATCGGAGACCTTCCGAATTTGGAAGTTCTTCTCGTCTGGGGGAACAACTTCTCGTTCATTTTGCCGGAGAATCTGGGAAGCAACGGGAAATTTAAGATGATTGACGTGACGAGCAATCATTTCACCGGTTCGGTTCCGAAGGATTTGTGTAAAGGAGGAAGGTTGGAGATTTTCATTCTCATGAATAATTCTTTCGACGGTCCGATTCCTGAGCAGCTCGGTGAGTGTAAGTCCTTGAAAAAAGTTCGAATTTCAAACAATTTCCTCAGTGGCTCGGTCCCTCCTGGGCTTTTCAATCTTCCATCTGCGTCGATTATCGACCTCAGTAACAACTTGTTATCCGGCGAGCTACCATCGGATATGTCAGGCGATGCTGTCGGAATTTTGACGCTTTCGGGTAATATGATCACCGGAAAAATCCCTCCGGCGATCGGGAAGCTGCGGAGCTTGCAGAATCTCTTACTAGACGCGAACCACTTTGTTGGCGAGATTCCCGAGGAAATGTTCAACTTGCCAATGCTGACGAAGGTGAACATAAGCTTCAACAATCTCAGTGGTTCGATTCCTGATTCCATCACTCACTGTGCTTCCTTAACCGCTGTTGATCTCAGCCGGAACAACCTCGCCGGAGAAATCCCGAGAGCGATCAATAACTTAGAAGATCTCAGCATCCTCAACCTCTCAATGAACCACCTCACAGGTTCAATCCCAGATGAAATCCGTTTCATGGTGAGCCTGACCACACTCGACCTCTCCAACAACAACCTTGAAGGCAGAATCCCCACAGGCGGCCAATTCAGCGTCTTCTCCGGCGAGGACTTCGCCGGAAACCCCAAACTCTGCTTCCCACAAGACCACTCCTGCAAACCTCACGAGCCCCTCAAATCAACCAAGATGATCGTCATAACAATCTCCCTCCTCACCACCACCCTCCTCGTCGTCATCACAATCTACACACTCCGAAAACGAAAGCACCACAAATCCCTGAACTGGAAGCTCACCTTATTCCGACGTCTGAACTTCAAAGTCGACGACGTCCTCGAATGCTTAAAGGAAGAGAACATAATCGGAAAAGGCGGCGCAGGGATCGTGTACAGAGGGAACACCAGAGACGGCACCGACGTGGCGATCAAGAGACTGGTGGGTCAGGGTCGGAGCGGCCGGAACGATTACGGGTTCAAGGCGGAGATAGAGACGTTAGGGAGGATCAGACACAGGAACATAGTGAGACTGTTAGGGTACGTATCGAACAAGGACACGAACTTGCTGGTTTATGAGTATATGAGCAATGGAAGCTTAGGGGAATGGCTTCATGGCGCGAAAGGAGGGCATTTGCAGTGGGAGGCGAGGTACAAGATCGCGGTGGAGGCGGCGAAGGGACTGTGTTATCTTCACCATGATTGCTCGCCGGGGATTATACATAGGGATGTGAAGTCGAATAATATATTGTTGGATGCAGATTTTGAAGCTCATGTTGCAGATTTTGGATTGGCTAAGTTTCTTCTTGATCCTGGTGCTTCTCAGTCCATGTCCTCCATTGCTGGTTCTTATGGCTACATCGCTCCAGAGTACGCTTACACACTGAAAGTGGACGAGAAGAGCGACGTGTACAGCTTCGGAGTGGTGCTGCTGGAGCTCATAGTGGGAAGGAAACCGGTGGGTGAGTTCGGCGACGGCGTCGACATCGTGGGGTGGGTGAAGCACACCACGTCGGAGCTGGCTCCTCCACGGTCGGACGCTGCGGTGGTGATGGCAGTGGTGGACCCGAGGCTCGGCGGGTATCCTCTCACCGGCGTCATTCACATGTTCAAGATAGCGATGATGTGCGTGGAAGAGAAAGGCAGCTCCAGGCCCACCATGAGAGAAGTCGTTCATATGCTCACCAATATCAATCCTCCCAATCTCATTCACCTCTAA 2916 0.4962 MRRSTLYSIPFLLSFLWYSSSLSSAYSDLDALLKLKASLKGPKASPFAMEDWKPSPSLFAHCNFSGVHCDDNLRVVSLNISFHPLFGSIPPEIGLLDKLVSLTLSQXNLTGELPKELANLASLQVLNISHNAFTGEFPGEITLNMTEIEVLDVYDNSFNGSLPLEVVRLKKLKQLWLSGNYFSGEIPESYSEFESLEILKLNENSLRGKIPASLAKLKKLRELYLGYSNVYQGGIPPELATMGTLQLIDLGSCNLSGEIPPILGNLKNLHSLFLQVNNLTGEIPPELSGMTSLKSLDLSINNLTGEIPSSFSRLTNLTLINLYENKLLGPIPPFIGDLPNLEVLLVWGNNFSFILPENLGSNGKFKMIDVTSNHFTGSVPKDLCKGGRLEIFILMNNSFDGPIPEQLGECKSLKKVRISNNFLSGSVPPGLFNLPSASIIDLSNNLLSGELPSDMSGDAVGILTLSGNMITGKIPPAIGKLRSLQNLLLDANHFVGEIPEEMFNLPMLTKVNISFNNLSGSIPDSITHCASLTAVDLSRNNLAGEIPRAINNLEDLSILNLSMNHLTGSIPDEIRFMVSLTTLDLSNNNLEGRIPTGGQFSVFSGEDFAGNPKLCFPQDHSCKPHEPLKSTKMIVITISLLTTTLLVVITIYTLRKRKHHKSLNWKLTLFRRLNFKVDDVLECLKEENIIGKGGAGIVYRGNTRDGTDVAIKRLVGQGRSGRNDYGFKAEIETLGRIRHRNIVRLLGYVSNKDTNLLVYEYMSNGSLGEWLHGAKGGHLQWEARYKIAVEAAKGLCYLHHDCSPGIIHRDVKSNNILLDADFEAHVADFGLAKFLLDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVKHTTSELAPPRSDAAVVMAVVDPRLGGYPLTGVIHMFKIAMMCVEEKGSSRPTMREVVHMLTNINPPNLIHL 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6001g00001 972 Gene3D Ribonuclease Inhibitor 459 627 IPR032675 -
Pral6001g00001 972 SUPERFAMILY Protein kinase-like (PK-like) 673 962 IPR011009 -
Pral6001g00001 972 FunFam Leucine-rich repeat receptor-like protein kinase 189 281 - -
Pral6001g00001 972 Pfam Leucine rich repeat 482 542 IPR001611 GO:0005515
Pral6001g00001 972 Pfam Leucine Rich Repeat 579 595 IPR001611 GO:0005515
Pral6001g00001 972 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515
Pral6001g00001 972 Gene3D Ribonuclease Inhibitor 193 304 IPR032675 -
Pral6001g00001 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 653 761 - -
Pral6001g00001 972 SUPERFAMILY RNI-like 77 400 - -
Pral6001g00001 972 FunFam Leucine-rich repeat receptor-like protein kinase TDR 311 624 - -
Pral6001g00001 972 SUPERFAMILY L domain-like 332 615 - -
Pral6001g00001 972 Gene3D Phosphorylase Kinase; domain 1 649 761 - -
Pral6001g00001 972 SMART serkin_6 684 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6001g00001 972 SMART LRR_typ_2 266 289 IPR003591 -
Pral6001g00001 972 SMART LRR_typ_2 120 144 IPR003591 -
Pral6001g00001 972 SMART LRR_typ_2 577 600 IPR003591 -
Pral6001g00001 972 SMART LRR_typ_2 338 362 IPR003591 -
Pral6001g00001 972 SMART LRR_typ_2 481 505 IPR003591 -
Pral6001g00001 972 SMART LRR_typ_2 553 576 IPR003591 -
Pral6001g00001 972 SMART LRR_typ_2 290 314 IPR003591 -
Pral6001g00001 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 762 971 - -
Pral6001g00001 972 Pfam Protein kinase domain 685 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6001g00001 972 Gene3D Ribonuclease Inhibitor 25 192 IPR032675 -
Pral6001g00001 972 Pfam Leucine rich repeat N-terminal domain 27 70 IPR013210 -
Pral6001g00001 972 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 627 965 - -
Pral6001g00001 972 Gene3D Transferase(Phosphotransferase) domain 1 762 968 - -
Pral6001g00001 972 ProSiteProfiles Protein kinase domain profile. 684 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6001g00001 972 PRINTS Leucine-rich repeat signature 293 306 - -
Pral6001g00001 972 PRINTS Leucine-rich repeat signature 577 590 - -
Pral6001g00001 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Pral6001g00001 972 Gene3D Ribonuclease Inhibitor 305 384 IPR032675 -
Pral6001g00001 972 Gene3D Ribonuclease Inhibitor 385 458 IPR032675 -
Pral6001g00001 972 FunFam Leucine-rich repeat receptor-like protein kinase 25 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6001g00001 Pral-Chr6001 5661 12854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6001g00001 25 967 Receptor kinase-like Gene Family AT1G75820 64.151 0.0 1218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral6001g00001 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6001g00001 - - lja:Lj3g3v3375770.1 1333.93