Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral6000g00001 ATGGAGCACGATGACAACGTTACGCTGTTTCCTGTGAAGGTCCTTCTGGATGATTTGGGTTTGGAATTTCTTGTGTCTTCCACTCACTGGCCACTGCAAAACGATTTTATTGGACCAAGTGGAGGGGAATACAAGAAGCTGATTGGTGGAGAGGTGGGAGACGACATGCAATTCCTATTACTACTTGTTCTTAACCTTCCGTTCTTCTTCCTCCCTCCGCCGCCCCCGCCACCGCTACCACCATCTCCGCCCCCCTTTTTCCCTTCCCGGCGATATGGCCCGAGTCAACGCGCAGGCCCCGCATCAGAGTCAGAACAGAACGACTCGCCCCGGAGCATTCTGTTCAACAAGTACGAGATGGGGAGGGTCCTGGGTCAGGGAAACTTCGCCAAGGTGTATTACGCCAGGAACCTTGTGACGAACGAGAGCGTCGCGATTAAGGTCATCAAGAAAGAGAAGCTCAAGAAAGAGAGGCTCGTGAGGCAGATCAAGCTGGAGGTTTCCGTGATGCGATTGGTCCGGCATCCTCACATCGTCGAGCTCAAGGAAGTTATGGCCACAAAAGGAAAGATCTTTCTGGTCATGGAATATGTCAAAGGTGGAGAATTGTTCTCCAAGGTTGCTAAAGGCAGGCTTAAGGAAGATGTCGCGAGAAAATATTTCCAGCAATTGATTAGCGCCATTGATTTCTGTCACAGCCGTGGAGTCACGCATCGTGATCTGAAGCCTGAGAACCTTCTTTTGGACGAGAACGAAGATCTGAAGGTTTCTGATTTTGGGTTGTCGGCACTGCCGGAGCAGCGTCGAGCCGACGGAATGCTCGTGACGCCGTGTGGAACGCCGGCTTACGTGGCGCCGGAGGTGCTGAAGAAGAAAGGGTATGATGGATCCAAAGCTGATATTTGGTCATGTGGTGTGATTCTCTATGCTCTTCTTTCTGGGTATCTGCCATTTCCGGGTGAGAATATTATGAAGATTTACAAGAAGGCATTCAAAGCTGAGTACGAATTACCAGATTGGATTTCACCCGAAGCTAAGAATTTGATCTCTAATCTTCTTGTCGCCGACCCAGAAAAGAGATATTCGATCCCAGATATCATGAAGGACCCATGGTTTCAAATCGGGTTCATGAAACCAATCGCGTTCTCGATAAAGAAGGAACCAGGTTTCGATTTCGACGAGGAGGAGAATGAAATTAAAGAGAAAGAAGGAGGAGAAGCAGTAGTAAGATCAGAAAAACCGTCCCGACCATTTTACAATGCGTTTGAGATAATCTCATCTCTGTCAAATGGGTTTGATCTGAGGAGCTTGTTCGAGACACGAAAGAGGTCTCCGTCGATGTTCCTGTCGAAGCTTTCAGCTCCGACGGTTGTGGCGAAGCTGGAGACGGTGGCGAAGAAGCTGAATTTTAAGATCACAGGGAGGAAGGATTTTAAGGTGAGGATGCAGGGGGAAACAGAGGGAAGGAAGGGGAAGCTAGCCATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAATTGTCCAAGTCATCTGGCGATACGCTCGAGTACATGAAGTTCTGTGAGGATGAAGTGAGGCCTGCACTGAAAGACATAGTCTGGAGCTGGCAAGGAGACAGTACTAATAACAACAACAACAACAATAATTCTCAAAATTAA 1671 0.4907 MEHDDNVTLFPVKVLLDDLGLEFLVSSTHWPLQNDFIGPSGGEYKKLIGGEVGDDMQFLLLLVLNLPFFFLPPPPPPPLPPSPPPFFPSRRYGPSQRAGPASESEQNDSPRSILFNKYEMGRVLGQGNFAKVYYARNLVTNESVAIKVIKKEKLKKERLVRQIKLEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGRLKEDVARKYFQQLISAIDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFPGENIMKIYKKAFKAEYELPDWISPEAKNLISNLLVADPEKRYSIPDIMKDPWFQIGFMKPIAFSIKKEPGFDFDEEENEIKEKEGGEAVVRSEKPSRPFYNAFEIISSLSNGFDLRSLFETRKRSPSMFLSKLSAPTVVAKLETVAKKLNFKITGRKDFKVRMQGETEGRKGKLAMTVEVFEVAPEVAVVELSKSSGDTLEYMKFCEDEVRPALKDIVWSWQGDSTNNNNNNNNSQN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral6000g00001 556 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 106 534 - -
Pral6000g00001 556 CDD CIPK_C 420 534 - -
Pral6000g00001 556 Gene3D Kinase associated domain 1, KA1 419 539 - -
Pral6000g00001 556 Gene3D Transferase(Phosphotransferase) domain 1 111 418 - -
Pral6000g00001 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Pral6000g00001 556 FunFam Non-specific serine/threonine protein kinase 110 197 - -
Pral6000g00001 556 SMART serkin_6 118 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6000g00001 556 SUPERFAMILY Protein kinase-like (PK-like) 114 373 IPR011009 -
Pral6000g00001 556 ProSitePatterns Protein kinases ATP-binding region signature. 124 151 IPR017441 GO:0005524
Pral6000g00001 556 ProSiteProfiles NAF domain profile. 414 439 IPR018451 GO:0007165
Pral6000g00001 556 ProSiteProfiles Protein kinase domain profile. 118 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6000g00001 556 Pfam Protein kinase domain 118 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral6000g00001 556 Pfam NAF domain 418 473 IPR004041 GO:0007165
Pral6000g00001 556 MobiDBLite consensus disorder prediction 79 109 - -
Pral6000g00001 556 FunFam Non-specific serine/threonine protein kinase 414 538 - -
Pral6000g00001 556 FunFam Non-specific serine/threonine protein kinase 111 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral6000g00001 Pral-Chr6000 13450 23225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral6000g00001 78 553 CBL-interacting serine-threonine protein kinases AT5G25110 60.924 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral6000g00001 Pkinase 9.6e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral6000g00001 - - gmx:100812424 681.789