Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5993g00001 ATGGCGGCTCTATGGGGATCGCTGGCCGCAGGGGGAGACATATCCAAGGCTCATATGGCTATGGTGATGGTTTCAGCTTTTCAGTGGAGGATACCACGTCATCACCAAAGTAGCCCTCAATGTTGGAGTCAACCAATTAGTGTGTTTTGCGTTTTCCGTGATCTCCTTGCCCTCGCTATTCTTGCTCCCATCGCTTACATCCGGGAAAAACGGACACGACCACCTATAACTAAACGCCTCCTGATATCATTTTTCTTTCTTGGATTAACAGGGATATTCGGCAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCAGCTGCGATACAGCCAGCCATTCCAGTCTTCACTTTTCTTTTGGCTGTAATGATGGGTACAGAAAGGGTGAATTTACTCAGATATGAAGGTCTGGCAAAAGTTGGAGGAACTCTCATCTGTGTTTGTGGGGCCATATTCATGGTTTTGTTTCGTGGTCCAGCATTGATAGGATACGCAGATTCGGACATTTTAGAACATAGCGAAATAACTGCTAGAGGTCAACCTGAACCATATGGATGGTTAATTGGCGGTTTAATGGATCTTGGTTTAGACCATTTTCATCTTGGGGTTCTGTGCTTGATTGGAAACTGCATGTGCATGGCTACTTTTCTGGCCATTCAGGCTCCGCTATTGAAAAAGTATCCTGCAAATCTATCTGTCACAGCATACTCTTACTTTTTTGGAGCTCTGCTAATGGTGACCACAGCATTTTTCATGACCAACGAGTCAACTGACTGGAGCTTGACGCCATCTGAAACATTTGCTGTTATTTATGCTGGAACCATTGCATCTGCCCTTAACTATGGACTCTTGACATGGTGCAACAAGATTTTGGGTCCGGCTATGGTTGCCCTTTACAACCCGCTTCAACCTGCAGCATCCGCCCTTCTGTCACGAATTTTCCTTGGAAGTCCTATTTTCTTGGGAAGTGTCCTTGGGGGATCTTTGATCATTGCTGGTCTATATGTGGTGACTTGGGCAACTTGTAGAGAAAGACAAGCGGCACTTGGAGTTATTCCTCAGGGCTCCTGGGTCTCCGAGCAAATGAGTCATACCGATGGATTAGTGAGCAAGAGTTCATTTCAGTTAGGTCACATTTTTTCAGGGTCACCGAAGTCTTCTGATTAA 1182 0.4484 MAALWGSLAAGGDISKAHMAMVMVSAFQWRIPRHHQSSPQCWSQPISVFCVFRDLLALAILAPIAYIREKRTRPPITKRLLISFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPAIPVFTFLLAVMMGTERVNLLRYEGLAKVGGTLICVCGAIFMVLFRGPALIGYADSDILEHSEITARGQPEPYGWLIGGLMDLGLDHFHLGVLCLIGNCMCMATFLAIQAPLLKKYPANLSVTAYSYFFGALLMVTTAFFMTNESTDWSLTPSETFAVIYAGTIASALNYGLLTWCNKILGPAMVALYNPLQPAASALLSRIFLGSPIFLGSVLGGSLIIAGLYVVTWATCRERQAALGVIPQGSWVSEQMSHTDGLVSKSSFQLGHIFSGSPKSSD 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5993g00001 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 346 - -
Pral5993g00001 393 PANTHER WAT1-RELATED PROTEIN 48 350 IPR030184 GO:0016020|GO:0022857
Pral5993g00001 393 Pfam EamA-like transporter family 48 157 IPR000620 GO:0016020
Pral5993g00001 393 Pfam EamA-like transporter family 206 343 IPR000620 GO:0016020
Pral5993g00001 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5993g00001 Pral-Chr5993 1042 5933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5993g00001 101 351 Nodulin-like Gene Family AT5G45370 71.315 6.99e-126 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5993g00001 - - gmx:100809051 572.007