Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral598g00001 ATGACGCAGCAGAATGTGATGGTCTCTGATGCCAATTCCAGAATCAACCTGGCTTTCACCGCCGCCGCCGTCTCTAACTCCTTCAATTTCACCACCGCACCTCACAAGCCCCCCGCACCACTCGGCGGCGGCTTCATCTCCATTTCAAGGAAGAAGTTCTTGAAGACCCTCGACATCAGTGGAGCCGCCAAAATTAATTCCTGGGTTGACTCCATGCGGGCCTCTTCCCCTACACACCGCTCCACCACTCTCACCACCTCTCCTTTTGACCCAGAACGCAACTCTTGGATCCTTCATCACCCATCTGCATTAGACATGTTTGAGCAAATCATCGACGCTTCCAGAGGAAAGCAAATAGTTGTGTTTCTCGACTACGATGGGACGCTCTCGCCTATCGTTGACGACCCTGATCGAGCTTTCATGTCCAATGGGATGAGGAAGACGGTGAGAAACCTTGCCAGGTGTTTTCCCACCGCTATAGTTAGCGGCAGATGCAGAGACAAGGTGTACAACTTTGTTCGCTTGGCAGAGCTATATTATGCAGGAAGCCATGGGATGGACATTAAAGGCCCGACCAAAATCTCTAAATACAATAAAGACAGTAAAGCGATTCTGTTTCAGCCTGCCTGTGAATTTTTACCCATGATAGATAAGGTGTATCAATTGTTACTTGAGAAAACAAGCTCAACTCCTGGAGCTAAAGTGGAGAACAATAAGTTCTGTGTCTCTGTTCATTTTCGCCGTGTTGATGAAAAGAAATGGAGCGAACTGGCAAACCAGGTTAGATCGGTGTTAAAGGAATACCCCAAGCTTCGTCTTACTCAAGGAAGGAAGGTACTTGAGATTCGTCCCCCCATTAAATGGGACAAAGGAGAGGCCTTGGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTGCAGACGTGTTTCCTGTTTACATTGGAGACGATCGATCCGATGAAGATGCATTCAAGAAACTGAGAGAGAGAGGACAAGGGTATGGCATTCTTGTCTCCAAATTTCCGAAAGATACGAGTGCATCTTACTCTTTACAAGAACCCGACGAGGTGATGGATTTTCTTCAGCGATTAGTGGAGTGGAAAAGAGTTTCGGTGCGAGCTCGTTCCAGGGTGTAA 1137 0.4741 MTQQNVMVSDANSRINLAFTAAAVSNSFNFTTAPHKPPAPLGGGFISISRKKFLKTLDISGAAKINSWVDSMRASSPTHRSTTLTTSPFDPERNSWILHHPSALDMFEQIIDASRGKQIVVFLDYDGTLSPIVDDPDRAFMSNGMRKTVRNLARCFPTAIVSGRCRDKVYNFVRLAELYYAGSHGMDIKGPTKISKYNKDSKAILFQPACEFLPMIDKVYQLLLEKTSSTPGAKVENNKFCVSVHFRRVDEKKWSELANQVRSVLKEYPKLRLTQGRKVLEIRPPIKWDKGEALEFLLESLGFANCADVFPVYIGDDRSDEDAFKKLRERGQGYGILVSKFPKDTSASYSLQEPDEVMDFLQRLVEWKRVSVRARSRV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral598g00001 378 CDD HAD_TPP 120 358 - -
Pral598g00001 378 FunFam Trehalose 6-phosphate phosphatase 119 204 - -
Pral598g00001 378 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 43 373 IPR044651 GO:0004805|GO:0005992
Pral598g00001 378 FunFam Trehalose 6-phosphate phosphatase 215 374 - -
Pral598g00001 378 Gene3D - 224 376 IPR023214 -
Pral598g00001 378 Gene3D - 119 203 IPR023214 -
Pral598g00001 378 SUPERFAMILY HAD-like 120 368 IPR036412 -
Pral598g00001 378 NCBIfam trehalose-phosphatase 117 365 IPR003337 GO:0003824|GO:0005992
Pral598g00001 378 FunFam Trehalose 6-phosphate phosphatase 209 285 - -
Pral598g00001 378 NCBIfam HAD-IIB family hydrolase 121 329 IPR006379 -
Pral598g00001 378 Pfam Trehalose-phosphatase 122 354 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral598g00001 Pral-Chr598 11001 13769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral598g00001 108 364 Trehalose Biosynthesis Gene Families AT1G70290 27.698 5.72e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral598g00001 K01087 - qsa:O6P43_023219 583.178