Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5987g00007 ATGGTTCGCCAAGCTACTTTAGTTATCATTGGTGTTACAGTTGGCGTGGCCTTTGGAATTTTTATCGCTTCCCTTATATTTTTTGGGATAAGGTGGTATAAGAAGCATGCTCGTCTTACATATTCTGCAAAAGAGAGTAGTTTAACCACTCTTCCAATACGCACAAATGGATTAGGAACAAGCACTGACTTTAGTGCCTCTCTTACAAGTTCCATATCCAATTCGATGTCAGAAAATCTGCAAAGAAACTCCAATGTCTCTTGGTGGAGTCATCAAAACAAAGATCGATTTTCTCCAACATCTGGCATTTCAAAGTACTCATACAAAGAGATCCAAAAGGCTACACAGAATTTCACAACTATTTTGGGACAAGGATCATTTGGCACAGTTTATAAAGCCACAATGCCTACAGGAGAGGTGGTAGCTGTGAAGGTGCTTGACTCTAATTCTAAACAAGGGGAGAAAGAATTCCAAACAGAGGTGCTTTTGCTGGGACGATTGCATCATCGGAATCTTGTGAATTTAGTAGGATATTGTGTAGATAAGGGACAGCGTATTCTGGTTTATGAGTTCATGAGCCATGGAAGCTTGTCAAACCTTTTATACAGTGATGTAAAGGCTTTGAGTTGGAACGAAAGGCTTCAAATTGTTATTGATATTTCACATGGAATTGAATACCTTCACGAAGGAGCAGTACCACCCGTTATACATCGTGATTTGAAGTCTGCCAATATATTGTTAGATCATTCGATGAGAGCTAAGGTTGCTGATTTTGGGTTGTCAAAGGAAGAGGTCTTTGATGGCCGGAATTCAGGCCTTAAAGGTACATACGGCTACATGGACCCAGCATACGTTTCCTCAAACAAGTTCACAATGAAGAGTGACATCTACAGTTTTGGTATCATCATTTTTGAGCTCATTACAGCCATTCACCCTCACCAAAATTTGATGGAATATATTAACCTTGCTGCAATGGAACATGATGGCGTAGATGAGATACTTGACAAACAACTTGTAGGAAAATGCAACCTTGAGGAAGTAAGGCAGCTTGCTAAAATTGCTTATAAATGTTTGCACAGATCTCCCAGGAAACGCCCTTCCATTGGTGAGGTTTCTCAGGGTATATTGAGAATAAAAGAAAGGCGCCTTGTGAAAGAAGATACCTTGTCATTTGCAGGCAGTAACTTCTCCAGAGCTTTGAGCCGAATAGAGGATCAGGTTGAATTAAATAGGTTAACCGCCATGAACCTTGGAGAAACTGGATGA 1266 0.4028 MVRQATLVIIGVTVGVAFGIFIASLIFFGIRWYKKHARLTYSAKESSLTTLPIRTNGLGTSTDFSASLTSSISNSMSENLQRNSNVSWWSHQNKDRFSPTSGISKYSYKEIQKATQNFTTILGQGSFGTVYKATMPTGEVVAVKVLDSNSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCVDKGQRILVYEFMSHGSLSNLLYSDVKALSWNERLQIVIDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEVFDGRNSGLKGTYGYMDPAYVSSNKFTMKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMEHDGVDEILDKQLVGKCNLEEVRQLAKIAYKCLHRSPRKRPSIGEVSQGILRIKERRLVKEDTLSFAGSNFSRALSRIEDQVELNRLTAMNLGETG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5987g00007 421 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Pral5987g00007 421 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 192 399 - -
Pral5987g00007 421 Gene3D Phosphorylase Kinase; domain 1 76 191 - -
Pral5987g00007 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Pral5987g00007 421 SUPERFAMILY Protein kinase-like (PK-like) 86 372 IPR011009 -
Pral5987g00007 421 ProSiteProfiles Protein kinase domain profile. 116 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5987g00007 421 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5987g00007 421 Gene3D Transferase(Phosphotransferase) domain 1 192 393 - -
Pral5987g00007 421 CDD STKc_IRAK 122 378 - -
Pral5987g00007 421 Pfam Protein tyrosine and serine/threonine kinase 118 372 IPR001245 GO:0004672|GO:0006468
Pral5987g00007 421 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 90 191 - -
Pral5987g00007 421 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5987g00007 Pral-Chr5987 21833 27144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5987g00007 102 371 Receptor kinase-like Gene Family AT3G19300 42.294 1.64e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pral5987g00007 PK_Tyr_Ser-Thr 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5987g00007 - - gmx:100819995 688.337