Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5986g00008 ATGGAGACATCCTCCTCAGGACTGAGAACTGGCAAGTGGTGTAAAGAAGAAGATGATCTTCTCAAGGCCTGTGTTCTTAAGTATGGTGAAGGAAAATGGCACCTTATTCCTCAGAGATCAGGCTTGAAAAGATGCAGAAAAAGCTGTAGGCTGAGGTGGTTAAACTATCTGAAACCGGACATCAAGTGGGGAGACTTCTCTGAGGATGAAATTGATATGATGATCAGGCTTCACAGACTCCTGGGAAACAGATGGTCACTGATAGCTGGAAGGCTTCCTGGAAGAACACCAAACGGTGTGAAAAACTACTGGAAAACCCATATGAGTGAGAAGGGACGACTTGTTTCATCTCAGGGGAGAGAGTTGGAAGAAAAAGCAGAGGAAACAACCATGAGAAGCCGTACACCAACAGTGATAAAGCCTCAAGCTTTCAGCTTATCGCCATCAAGAAGCTCATCGTCCTGGTGGAGAAATAAAAATCCAGATGGTGGTGAAGTTAGCGAAGACAAAAGTGCAAGCAGTGGTAGTGGGCCAGATGAAGAGCAAAACCAGAAGCTGGTAGATGAGGAGTCGGTGGAGTGGTGGAAATGCTTGCTTCTTGATGATAACGACATTGAGAACGAAGGTCAAGAGAAAATTGGCTCATCATTATCAACATCATCATCAACGTCATCGACGGAGCAAGATGGCAAGTCTGATCAATTCTGGGACCAGCAACTTACTTGGACTGATGACTTTCCTCTAATCACCACTCTCCCAGATTTTCTAGCCTAA 774 0.4509 METSSSGLRTGKWCKEEDDLLKACVLKYGEGKWHLIPQRSGLKRCRKSCRLRWLNYLKPDIKWGDFSEDEIDMMIRLHRLLGNRWSLIAGRLPGRTPNGVKNYWKTHMSEKGRLVSSQGRELEEKAEETTMRSRTPTVIKPQAFSLSPSRSSSSWWRNKNPDGGEVSEDKSASSGSGPDEEQNQKLVDEESVEWWKCLLLDDNDIENEGQEKIGSSLSTSSSTSSTEQDGKSDQFWDQQLTWTDDFPLITTLPDFLA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5986g00008 257 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 215 - -
Pral5986g00008 257 MobiDBLite consensus disorder prediction 114 187 - -
Pral5986g00008 257 CDD SANT 12 57 IPR001005 -
Pral5986g00008 257 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Pral5986g00008 257 FunFam Myb transcription factor 10 62 - -
Pral5986g00008 257 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Pral5986g00008 257 MobiDBLite consensus disorder prediction 114 131 - -
Pral5986g00008 257 MobiDBLite consensus disorder prediction 206 235 - -
Pral5986g00008 257 MobiDBLite consensus disorder prediction 132 160 - -
Pral5986g00008 257 CDD SANT 66 108 IPR001005 -
Pral5986g00008 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 112 IPR017930 -
Pral5986g00008 257 SMART sant 62 110 IPR001005 -
Pral5986g00008 257 SMART sant 9 59 IPR001005 -
Pral5986g00008 257 Gene3D - 2 63 - -
Pral5986g00008 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 61 IPR017930 -
Pral5986g00008 257 Gene3D - 64 137 - -
Pral5986g00008 257 MobiDBLite consensus disorder prediction 210 235 - -
Pral5986g00008 257 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Pral5986g00008 257 MobiDBLite consensus disorder prediction 167 181 - -
Pral5986g00008 257 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Pral5986g00008 257 Pfam Myb-like DNA-binding domain 64 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5986g00008 Pral-Chr5986 39009 40166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5986g00008 1 153 MYB Transcription Factor Family AT1G66370 54.545 2.58e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5986g00008 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5986g00008 - K09422 adu:107471154 198.364