Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5985g00002 ATGAAGCTCTTGTCTCTAAAGGGCAACAAAATCACTGGGGAAACAAACTTTTCGACTTGCAAAGCTTTGCAGCATCTGGACCTTTCCTCTAACAATTTCTCCCTCGCTGTTCCTTCTTTGGGTGAGTGTCTGGCTTTAGAGTACCTCGACATCTCTGCAAACAAGTTTTACGGTGACATTGGTCGCGCCCTGTCCAGTTGCAAGCAGCTCACCTTCTTGAACATCTCAAGCAACCAGTTCTCCGGTCCTGTTCCTTCGCTTCCATCTGGTTCTCTGCAGTACTTACATCTCGCCGACAACCATTTTCGGGGACAGATTCCTGCTGGCCTTTCTGACTTGTGCCCCACCCTGGTAGTACTCGATCTTTCCTTAAACAACCTTTCCGGTGTTCTTCCAACCGATTTCAGGGCTTGCTCTTCATTAGAAACCTTTGATATATCCAACAACAAGTTCACCGGTGAACTTCCGATTGATTTTTTCGCAGAATTGAGTGGCTTGAAGAGGCTGGTTCTTTCCTTCAATGACTTCACCGGTACCCTGCCTCATACTCTGTCTCAGTTCTCGACGTTGGAGTCGTTGGATCTGAGCTCCAATAACCTCAGTGGTTCAGTTCCTGGAGGGCTCTGTGACGATCCGAGGAATAATTTGAAAGAATTATACCTGCAGAATAATTTGTTGACAGGTTCTATTCCACCCGCACTCAGCAACTGTTCCCAGCTTGTGGCTTTGGATTTGAGTTTCAACTACTTGACGGGGACTATCCCTTCCAGCTTTGGGTCCCTTTCAAAACTCAAAGATTTGATTCTTTGGCTGAACCGGCTCCATGGAGAAATACCCCAAGAGCTTAAGCACATTAAGACTCTAGAGAATTTGATTCTGGACTTCAATGAGCTATCTGGGACCATTCCTTCTGGCTTAAGCAACTGCACCAGCATGAATTGGTTGTCCTTGTCTAATAACAGGTTGAGTGGGGAGATTCCGGCATGGATTGGTCAGCTTTCGAATCTTGCGATCTTGAAATTGAGTAATAACTCCTTCTCTGGGAGGATTCCGCCGGAGCTTGGGGATTGTCAAAGATTGATATGGTTGGATCTGAATACAAATTATCTGAGTGGATCAATTCCTCCTGAGTTGTTTAAGCAGTCGGGCAAAATTGAAGTTAATTTCATCAGTCGAAAGACATATGTGTACATCAAGACCGACGGTAGTAAGCAGTGCCATGGAGCAGGAAATTTGCTAGAGTTTGCTGGCATTAGTCTGGAGCAGATGGGCAGAATTTCAACCAGGAGCCCTTGCAATTTCACTAGCTTCACTCGAGTTTATAATGGTAAGGCCCGTCCCAAATTTAGTAGTGGTTCTATGATTTTTTTGGACATTTCGCATAATATGTTGTCGGGTACTCTACCCAAGGAGATGGGGAGTATGAACACTTTGTTTATTCTGAACTTGGGATACAACAATTTATCCGGGAACATCCCACCGGAATTCGGAGACATGAAAAATCTCAACATTCTTGACCTCTCCAACAATCGGCTTGAAGGACAGATTCCTCAATCGCTGACAGGCATTTCCATGCTCACGGAAATTGATATGTCAAACAACAATCTCTCAGGATTGATTCCTGAATCTGGTCAATTTGATACCTTTCCAGCTGCCAAATTTGCAAATAATTCTGGTCTCTGTGGTGTCCCTCTTGCTTTATGTGGATCAGACTCGAGATCAAGTGCAGATGCCCGGCATCAGAGGTCTAACCAGAGACGGGCATCTCTGGTGAGGAGTGTGTCCATTGGATTGCTGTTCGCACTCTTTTGCATCCTTGGTCTAATTATAATCGCCTTCGAGGCAAGAAAGAGAAGGAAGAAGAAGGAGGCTGCCCTGGACGTCTACATCGACAGCAGGTCTCACTCAGGTACAGCTAATGCTGGTTGGAAGGTGAGTGCCCGTGAAGCCCTTAGCATAAATCTTGCAACTTTCGAGAAGCCCCTTCGGAAGCTTACTTTTGCCGACCTCCTTGAAGCCACAAATGGTTTCCACAATGACAGTCTTATTGGTAAAGGTGGTTTTGGAGATGTATATAAGGCTCAGTTGAAAGATGGAAGTGTTGTGGCGATTAAGAAACTGATTCATATCAGCGGACAAGGGGACAGGGAATTCACCGCTGAAATGGAAACCATCGGGAAAATTAAGCATCGGAACCTTGTTCCCCTTCTCGGATACTGCAAAGTTGGAGAAGAAAGACTCTTGGTTTATGAGTACATGAAATATGGAAGCCTAGAGGATGTTTTGCATGATCAGAAGAAAGCCGGGATAAAGCTGAACTGGGCAGCCAGGAGGAAGATTGCAATTGGAGCTGCCAGGGGATTGGCTTTTCTTCACCACAATTGCAATCCTCATATAATTCACAGAGACATGAAATCAAGCAATGTGTTGCTTGATGGGAATCTGGAAGCCAGAGTCTCCGATTTTGGAATGGCTAGGCTCATGAGTGCTATGGACACCCATTTAAGTGTCAGCACACTAGCAGGCACCCCGGGTTATGTTCCTCCTGAATACTACCAGAGCTTTAGGTGCTCTACTAAAGGTGATGTTTATAGTTACGGTGTAGTTTTATTGGAGCTGCTGACAGGGAAACGACCCACGGATTCATCAGACTTTGGTGATAACAATCTTGTGGGATGGGTTAAACAGCATGCTAAATTAAAAATAAGTGATGTTTTTGACCCAGAGCTCATGAAAGAGGATCCGAGTCTTGAGATTGAACTTTTACAACACTTAAGAGTTGCCTGTGCTTGTCTTGATGATCGACCTCTGCGGCGCCCAACAATGATTCAAGTGATGGCGATGTTCAAGGAAATCCAAGCAGGATCTGGGATGGATTCCCAGTCTACCATCACGAGCGAGGATGGTGGATTTGGCGCCATGGAAATGGTAGATATGAGCATAAAAGAGATCCCTGAATTAAGCAGCAAGCAGTAG 2976 0.453 MKLLSLKGNKITGETNFSTCKALQHLDLSSNNFSLAVPSLGECLALEYLDISANKFYGDIGRALSSCKQLTFLNISSNQFSGPVPSLPSGSLQYLHLADNHFRGQIPAGLSDLCPTLVVLDLSLNNLSGVLPTDFRACSSLETFDISNNKFTGELPIDFFAELSGLKRLVLSFNDFTGTLPHTLSQFSTLESLDLSSNNLSGSVPGGLCDDPRNNLKELYLQNNLLTGSIPPALSNCSQLVALDLSFNYLTGTIPSSFGSLSKLKDLILWLNRLHGEIPQELKHIKTLENLILDFNELSGTIPSGLSNCTSMNWLSLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCQRLIWLDLNTNYLSGSIPPELFKQSGKIEVNFISRKTYVYIKTDGSKQCHGAGNLLEFAGISLEQMGRISTRSPCNFTSFTRVYNGKARPKFSSGSMIFLDISHNMLSGTLPKEMGSMNTLFILNLGYNNLSGNIPPEFGDMKNLNILDLSNNRLEGQIPQSLTGISMLTEIDMSNNNLSGLIPESGQFDTFPAAKFANNSGLCGVPLALCGSDSRSSADARHQRSNQRRASLVRSVSIGLLFALFCILGLIIIAFEARKRRKKKEAALDVYIDSRSHSGTANAGWKVSAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGKGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKAGIKLNWAARRKIAIGAARGLAFLHHNCNPHIIHRDMKSSNVLLDGNLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSSDFGDNNLVGWVKQHAKLKISDVFDPELMKEDPSLEIELLQHLRVACACLDDRPLRRPTMIQVMAMFKEIQAGSGMDSQSTITSEDGGFGAMEMVDMSIKEIPELSSKQ 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5985g00002 991 PRINTS Leucine-rich repeat signature 499 512 - -
Pral5985g00002 991 PRINTS Leucine-rich repeat signature 190 203 - -
Pral5985g00002 991 SMART LRR_typ_2 499 522 IPR003591 -
Pral5985g00002 991 SMART LRR_typ_2 20 43 IPR003591 -
Pral5985g00002 991 SMART LRR_typ_2 114 137 IPR003591 -
Pral5985g00002 991 SMART LRR_typ_2 187 211 IPR003591 -
Pral5985g00002 991 SMART LRR_typ_2 163 186 IPR003591 -
Pral5985g00002 991 SMART LRR_typ_2 333 357 IPR003591 -
Pral5985g00002 991 SMART LRR_typ_2 523 546 IPR003591 -
Pral5985g00002 991 SMART LRR_typ_2 215 237 IPR003591 -
Pral5985g00002 991 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 211 - -
Pral5985g00002 991 Pfam Protein kinase domain 677 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5985g00002 991 CDD STKc_IRAK 683 952 - -
Pral5985g00002 991 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Pral5985g00002 991 FunFam Brassinosteroid LRR receptor kinase 753 954 - -
Pral5985g00002 991 Gene3D Phosphorylase Kinase; domain 1 638 752 - -
Pral5985g00002 991 ProSiteProfiles Protein kinase domain profile. 677 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5985g00002 991 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 451 568 - -
Pral5985g00002 991 Gene3D Ribonuclease Inhibitor 8 569 IPR032675 -
Pral5985g00002 991 Gene3D Transferase(Phosphotransferase) domain 1 753 954 - -
Pral5985g00002 991 SUPERFAMILY L domain-like 453 576 - -
Pral5985g00002 991 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 250 954 - -
Pral5985g00002 991 SUPERFAMILY RNI-like 91 378 - -
Pral5985g00002 991 Pfam Brassinosteroid receptor island domain 383 450 IPR045381 -
Pral5985g00002 991 SUPERFAMILY L domain-like 2 128 - -
Pral5985g00002 991 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 212 394 - -
Pral5985g00002 991 Pfam Leucine rich repeat 215 274 IPR001611 GO:0005515
Pral5985g00002 991 Pfam Leucine rich repeat 287 345 IPR001611 GO:0005515
Pral5985g00002 991 Pfam Leucine rich repeat 140 200 IPR001611 GO:0005515
Pral5985g00002 991 Pfam Leucine rich repeat 496 536 IPR001611 GO:0005515
Pral5985g00002 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Pral5985g00002 991 Gene3D - 390 450 - -
Pral5985g00002 991 SUPERFAMILY Protein kinase-like (PK-like) 658 949 IPR011009 -
Pral5985g00002 991 FunFam serine/threonine-protein kinase BRI1-like 2 639 752 - -
Pral5985g00002 991 SMART serkin_6 677 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5985g00002 Pral-Chr5985 7086 10515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5985g00002 1 986 Receptor kinase-like Gene Family AT4G39400 71.658 0.0 1404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pral5985g00002 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5985g00002 K13415 - qsa:O6P43_023302 1548.87