Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5985g00001 ATGCTTCACAAGATGAAACCCTTCTCTCCCGCCAACCCTCATCGCTCTTTCTTCCTCTTGTTCTCCCTAGCTCTTCTCTCCCTCCAACCTCCTCCCTCATCCTCTGCTTCTTCAGCTTTCATAGACGAAACCCGCCAGCTTCTCGCCTTCAAGAATTCCCTTCCTGACCCCTCCCTTCTCCCCAGCTGGCTCCCTAATCACAGTCCCTGTTCCTTCATTCATGTTTCCTGCCGGGATACCCTCGTTTCTTCCGTAGACCTCAGCCGGGTCCCCTTGAACACTAATTTCAGCCTTGTCTCTACCTATCTACTCTCCCTCGACCACCTGCAAGTCCTTAATCTGCAAGCCACCAATCTTTCCGGCGCCATTTCTTTCTCGGCCGGCTCCAGGTGTGGCAACTCACTGAGCTCCTTAGATCTATCTCAGAACAGTTTGTCTGGCCCGGTTTCGTCCTTGAACTACCTGTCCTCTTGTTCGGCCCTGAAAGCTGTCAACCTTTCAGGTAACCTCCTAGAATTTTCTGGCAGAGACTCAACCGGGTTGAGGCTCAGTCTCCAGGTTCTCGATCTCTCTTACAACAATAAGATATCGGGTCCCAACTTTCTCCCATGGATCTTATCACAGGGCTGCGACGACATGAAGCTCTTGTCTCTAAAGGGCAACAAAATCACTGGGGAAACAAACTTTTCGACTTGCAAAGCTTTGCAGCATCTGGACCTTTCCTCTAACAATTTCTCCCTCGCTGTTCCTTCTTTGGGTGAGTGTCTGGCTTTAGAGTACCTCGACATCTCTGCAAACAAGTTTTACGGTGACATTGGTCGCGCCCTGTCCAGTTGCAAGCAGCTCACCTTCTTGAACATCTCAAGCAACCAGTTCTCCGGTCCTGTTCCTTCGCTTCCATCTGGTTCTCTGCAGTACTTACATCTCGCCGACAACCATTTTCGGGGACAGATTCCTGCTGGCCTTTCTGACTTGTGCCCCACCCTGGTAGTACTCGATCTTTCCTTAAACAACCTTTCCGGTGTTCTTCCAACCGATTTCAGGGCTTGCTCTTCATTAGAAACCTTTGATATATCCAACAACAAGTTCACCGGTGAACTTCCGATTGATTTTTTCGCAGAATTGAGTGGCTTGAAGAGGCTGGTTCTTTCCTTCAATGACTTCACCGGTACCCTGCCTCATACTCTGTCTCAGTTCTCGACGTTGGAGTCGTTGGATCTGAGCTCCAATAACCTCAGTGGTTCAGTTCCTGGAGGGCTCTGTGACGATCCGAGGAATAATTTGAAAGAATTATACCTGCAGAATAATTTGTTGACAGGTTCTATTCCACCCGCACTCAGCAACTGTTCCCAGCTTGTGGCTTTGGATTTGAGTTTCAACTACTTGACGGGGACTATCCCTTCCAGCTTTGGGTCCCTTTCAAAACTCAAAGATTTGATTCTTTGGCTGAACCGGCTCCATGGAGAAATACCCCAAGAGCTTAAGCACATTAAGACTCTAGAGAATTTGATTCTGGACTTCAATGAGCTATCTGGGACCATTCCTTCTGGCTTAAGCAACTGCACCAGCATGAATTGGTTGTCCTTGTCTAATAACAGGTTGAGTGGGGAGATTCCGGCATGGATTGGTCAGCTTTCGAATCTTGCGATCTTGAAATTGAGTAATAACTCCTTCTCTGGGAGGATTCCGCCGGAGCTTGGGGATTGTCAAAGATTGATATGGTTGGATCTGAATACAAATTATCTGAGTGGATCAATTCCTCCTGAGTTGTTTAAGCAGTCGGGCAAAATTGAAGTTAATTTCATCAGTCGAAAGACATATGTGTACATCAAGACCGACGGTAGTAAGCAGTGCCATGGAGCAGGAAATTTGCTAGAGTTTGCTGGCATTAGTCTGGAGCAGATGGGCAGAATTTCAACCAGGAGCCCTTGCAATTTCACTAGCTTCACTCGAGTTTATAATGGTAAGGCCCGTCCCAAATTTAGTAGTGGTTCTATGATTTTTTTGGACATTTCGCATAATATGTTGTCGGGTACTCTACCCAAGGAGATGGGGAGTATGAACACTTTGTTTATTCTGAACTTGGGATACAACAATTTATCCGGGAACATCCCACCGGAATTCGGAGACATGAAAAATCTCAACATTCTTGACCTCTCCAACAATCGGCTTGAAGGACAGATTCCTCAATCGCTGACAGGCATTTCCATGCTCACGGAAATTGATATGTCAAACAACAATCTCTCAGGATTGATTCCTGAATCTGGTCAATTTGATACCTTTCCAGCTGCCAAATTTGCAAATAATTCTGGTCTCTGTGGTGTCCCTCTTGCTTTATGTGGATCAGACTCGAGATCAAGTGCAGATGCCCGGCATCAGAGGTCTAACCAGAGACGGGCATCTCTGGTGAGGAGTGTGTCCATTGGATTGCTGTTCGCACTCTTTTGCATCCTTGGTCTAATTATAATCGCCTTCGAGGCAAGAAAGAGAAGGAAGAAGAAGGAGGCTGCCCTGGACGTCTACATCGACAGCAGGTCTCACTCAGGTACAGCTAATGCTGGTTGGAAGGTGAGTGCCCGTGAAGCCCTTAGCATAAATCTTGCAACTTTCGAGAAGCCCCTTCGGAAGCTTACTTTTGCCGACCTCCTTGAAGCCACAAATGGTTTCCACAATGACAGTCTTATTGGTAAAGGTGGTTTTGGAGATGTATATAAGGCTCAGTTGAAAGATGGAAGTGTTGTGGCGATTAAGAAACTGATTCATATCAGCGGACAAGGGGACAGGGAATTCACCGCTGAAATGGAAACCATCGGGAAAATTAAGCATCGGAACCTTGTTCCCCTTCTCGGATACTGCAAAGTTGGAGAAGAAAGACTCTTGGTTTATGAGTACATGAAATATGGAAGCCTAGAGGATGTTTTGCATGATCAGAAGAAAGCCGGGATAAAGCTGAACTGGGCAGCCAGGAGGAAGATTGCAATTGGAGCTGCCAGGGGATTGGCTTTTCTTCACCACAATTGCAATCCTCATATAATTCACAGAGACATGAAATCAAGCAATGTGTTGCTTGATGGGAATCTGGAAGCCAGAGTCTCCGATTTTGGAATGGCTAGGCTCATGAGTGCTATGGACACCCATTTAAGTGTCAGCACACTAGCAGGCACCCCGGGTTATGTTCCTCCTGAATACTACCAGAGCTTTAGGTGCTCTACTAAAGGTGATGTTTATAGTTACGGTGTAGTTTTATTGGAGCTGCTGACAGGGAAACGACCCACGGATTCATCAGACTTTGGTGATAACAATCTTGTGGGATGGGTTAAACAGCATGCTAAATTAAAAATAAGTGATGTTTTTGACCCAGAGCTCATGAAAGAGGATCCGAGTCTTGAGATTGAACTTTTACAACACTTAAGAGTTGCCTGTGCTTGTCTTGATGATCGACCTCTGCGGCGCCCAACAATGATTCAAGTGATGGCGATGTTCAAGGAAATCCAAGCAGGATCTGGGATGGATTCCCAGTCTACCATCACGAGCGAGGATGGTGGATTTGGCGCCATGGAAATGGTAGATATGAGCATAAAAGAGATCCCTGAATTAAGCAGCAAGCAGTAG 3612 0.4648 MLHKMKPFSPANPHRSFFLLFSLALLSLQPPPSSSASSAFIDETRQLLAFKNSLPDPSLLPSWLPNHSPCSFIHVSCRDTLVSSVDLSRVPLNTNFSLVSTYLLSLDHLQVLNLQATNLSGAISFSAGSRCGNSLSSLDLSQNSLSGPVSSLNYLSSCSALKAVNLSGNLLEFSGRDSTGLRLSLQVLDLSYNNKISGPNFLPWILSQGCDDMKLLSLKGNKITGETNFSTCKALQHLDLSSNNFSLAVPSLGECLALEYLDISANKFYGDIGRALSSCKQLTFLNISSNQFSGPVPSLPSGSLQYLHLADNHFRGQIPAGLSDLCPTLVVLDLSLNNLSGVLPTDFRACSSLETFDISNNKFTGELPIDFFAELSGLKRLVLSFNDFTGTLPHTLSQFSTLESLDLSSNNLSGSVPGGLCDDPRNNLKELYLQNNLLTGSIPPALSNCSQLVALDLSFNYLTGTIPSSFGSLSKLKDLILWLNRLHGEIPQELKHIKTLENLILDFNELSGTIPSGLSNCTSMNWLSLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCQRLIWLDLNTNYLSGSIPPELFKQSGKIEVNFISRKTYVYIKTDGSKQCHGAGNLLEFAGISLEQMGRISTRSPCNFTSFTRVYNGKARPKFSSGSMIFLDISHNMLSGTLPKEMGSMNTLFILNLGYNNLSGNIPPEFGDMKNLNILDLSNNRLEGQIPQSLTGISMLTEIDMSNNNLSGLIPESGQFDTFPAAKFANNSGLCGVPLALCGSDSRSSADARHQRSNQRRASLVRSVSIGLLFALFCILGLIIIAFEARKRRKKKEAALDVYIDSRSHSGTANAGWKVSAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGKGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKAGIKLNWAARRKIAIGAARGLAFLHHNCNPHIIHRDMKSSNVLLDGNLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSSDFGDNNLVGWVKQHAKLKISDVFDPELMKEDPSLEIELLQHLRVACACLDDRPLRRPTMIQVMAMFKEIQAGSGMDSQSTITSEDGGFGAMEMVDMSIKEIPELSSKQ 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5985g00001 1203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 427 1162 - -
Pral5985g00001 1203 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 226 318 - -
Pral5985g00001 1203 CDD STKc_IRAK 895 1164 - -
Pral5985g00001 1203 Gene3D Phosphorylase Kinase; domain 1 850 964 - -
Pral5985g00001 1203 Pfam Brassinosteroid receptor island domain 595 662 IPR045381 -
Pral5985g00001 1203 Gene3D Transferase(Phosphotransferase) domain 1 965 1166 - -
Pral5985g00001 1203 SUPERFAMILY RNI-like 275 590 - -
Pral5985g00001 1203 Pfam Leucine rich repeat N-terminal domain 42 77 IPR013210 -
Pral5985g00001 1203 ProSiteProfiles Protein kinase domain profile. 889 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5985g00001 1203 FunFam serine/threonine-protein kinase BRI1-like 2 851 964 - -
Pral5985g00001 1203 SUPERFAMILY L domain-like 67 368 - -
Pral5985g00001 1203 Pfam Leucine rich repeat 499 557 IPR001611 GO:0005515
Pral5985g00001 1203 Pfam Leucine rich repeat 708 748 IPR001611 GO:0005515
Pral5985g00001 1203 Pfam Leucine rich repeat 352 412 IPR001611 GO:0005515
Pral5985g00001 1203 Pfam Leucine rich repeat 427 486 IPR001611 GO:0005515
Pral5985g00001 1203 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 663 780 - -
Pral5985g00001 1203 Pfam Protein kinase domain 889 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5985g00001 1203 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 423 606 - -
Pral5985g00001 1203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1011 1023 IPR008271 GO:0004672|GO:0006468
Pral5985g00001 1203 FunFam Brassinosteroid LRR receptor kinase 965 1166 - -
Pral5985g00001 1203 SUPERFAMILY L domain-like 665 788 - -
Pral5985g00001 1203 SMART LRR_typ_2 399 423 IPR003591 -
Pral5985g00001 1203 SMART LRR_typ_2 232 255 IPR003591 -
Pral5985g00001 1203 SMART LRR_typ_2 545 569 IPR003591 -
Pral5985g00001 1203 SMART LRR_typ_2 326 349 IPR003591 -
Pral5985g00001 1203 SMART LRR_typ_2 711 734 IPR003591 -
Pral5985g00001 1203 SMART LRR_typ_2 735 758 IPR003591 -
Pral5985g00001 1203 SMART LRR_typ_2 375 398 IPR003591 -
Pral5985g00001 1203 SMART LRR_typ_2 427 449 IPR003591 -
Pral5985g00001 1203 Gene3D Ribonuclease Inhibitor 47 780 IPR032675 -
Pral5985g00001 1203 SMART serkin_6 889 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5985g00001 1203 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 319 416 - -
Pral5985g00001 1203 ProSitePatterns Protein kinases ATP-binding region signature. 895 918 IPR017441 GO:0005524
Pral5985g00001 1203 SUPERFAMILY Protein kinase-like (PK-like) 870 1161 IPR011009 -
Pral5985g00001 1203 Gene3D - 600 662 - -
Pral5985g00001 1203 PRINTS Leucine-rich repeat signature 402 415 - -
Pral5985g00001 1203 PRINTS Leucine-rich repeat signature 711 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5985g00001 Pral-Chr5985 6475 10515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5985g00001 34 1198 Receptor kinase-like Gene Family AT4G39400 68.596 0.0 1552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pral5985g00001 Pkinase 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5985g00001 K13415 - qsa:O6P43_023302 1753.8