Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5984g00035 ATGAGCCCCACCATGGAGAATAATCATGAATATGATGTTTCTCTTGATGCTATGATGCTGGCAAGTGCCATGATTTACCCCGCTGTGTTAAATGCTGCCATTGAGCTCAACCTGTTTAAGATCATTGGAGAGGGAAGCCCTAAGGGCATGTCGCCCTCTGAAGTTGCTTCAAAGCTTCCAAATCCACATGCGGACACGGCTCGCCGACTCGACCGATTGCTGTGTTTGCTGGCAAGTCATTCTGTTTTGACTTGTTCTTCCAAGAAGCTTGATGATGGCACCACAGAGAGGCTTTATGCTCTTTCTCCTACCGGTAAATACCTTGTCCCCGATGAAGATGGAGTCTCTTATGCCTCAGTCTCACTATTAAGCTACCATCCAGCTTATATCAAAGTTCGGGAAAACATCAAGCAAGTGATACTGGACGAGGAAGAGGACCTGTTCAAGAAAGTTCATGGGATGTCGATGTTTGAGTACATGAAAAAAGATGCGACCTTCGAAACTCTTTTTCACAAGGCAATGGCCGATCTTTCATTCATGCACATGAAGCAGATCCTTGAGAAATACCAAGGATTCGAAGGAATATCAACTCTGGTTGATGTTGCTGGTGGCATCGGCCAAAGCCTCAAAATGATCGTCTCGAAGTACCCTTCAATTCAGGGCATTAACTTCGATTTGCCACATGTTGTTCAGCATGCTCCATCCTACCCAGGAGTCAAACATGTTGGAGGAAGTATGTTCGAAGGTGTCCCGGAAGGTGATGGGATAATGATCAAGGCTACAACTCACAACTGGGCAGATGAAAAATGCATACAAGTTCTGAAGAATTGTCACAAGTCCCTCAAGAAAGGTGGGAAGCTTATTATTATTGACCTAATAATGCCGGAAGCACCAAATGCAACCGACGGAGATAAATATGTTGCGATTCTGGACAACGTCATGTTTCTGCAAGCTGGTGGGAAGGAAAGAACCGAGAAAGAATTGGAAGCACTGGGCAAAGCTGCTGGCTTTTCCAGCTATCGTGTTGCCGCTCGTGTTTTCTCATCTGCCCTGGGAGTCATCGAGTTTTACAAATAA 1077 0.454 MSPTMENNHEYDVSLDAMMLASAMIYPAVLNAAIELNLFKIIGEGSPKGMSPSEVASKLPNPHADTARRLDRLLCLLASHSVLTCSSKKLDDGTTERLYALSPTGKYLVPDEDGVSYASVSLLSYHPAYIKVRENIKQVILDEEEDLFKKVHGMSMFEYMKKDATFETLFHKAMADLSFMHMKQILEKYQGFEGISTLVDVAGGIGQSLKMIVSKYPSIQGINFDLPHVVQHAPSYPGVKHVGGSMFEGVPEGDGIMIKATTHNWADEKCIQVLKNCHKSLKKGGKLIIIDLIMPEAPNATDGDKYVAILDNVMFLQAGGKERTEKELEALGKAAGFSSYRVAARVFSSALGVIEFYK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5984g00035 358 Gene3D - 1 108 IPR036388 -
Pral5984g00035 358 FunFam Caffeic acid 3-O-methyltransferase 1 108 - -
Pral5984g00035 358 PANTHER O-METHYLTRANSFERASE 18 347 IPR016461 GO:0008168
Pral5984g00035 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 358 IPR016461 GO:0008168
Pral5984g00035 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 343 IPR029063 -
Pral5984g00035 358 CDD AdoMet_MTases 197 294 - -
Pral5984g00035 358 Pfam Dimerisation domain 29 78 IPR012967 GO:0046983
Pral5984g00035 358 Pfam O-methyltransferase domain 136 338 IPR001077 GO:0008171
Pral5984g00035 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Pral5984g00035 358 Gene3D Vaccinia Virus protein VP39 109 358 IPR029063 -
Pral5984g00035 358 SUPERFAMILY "Winged helix" DNA-binding domain 11 113 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5984g00035 Pral-Chr5984 210698 212328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5984g00035 12 358 Monolignol Biosynthesis Gene Families AT5G54160 48.424 1.84e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5984g00035 - - qsu:112031144 408.297