Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5984g00033 ATGATGAGCTTCACTCAGATTCATCAAAACAATGGTCATGAAGATCACGATGAAGGTCATGCTCGCATCCAAGCCTTGATCCTAGCATGTGGACACACATACCCAGCTGCCATAAACGCAGCCAGTGATCTAGACCTCTTTGATATCATCGCAAAGGGAAGCCCCAACAATGGCGGCGCTCTTGTTTCTGTGTCTGAGATTGCTTCTCAGCTTCCTGTTCTGACCTCCAAGGTTTCCATATCAAAACTCGATCGCCTGCTTCGTTTTCTGGTGAGCTTCTCAGTCCTCACTTTCTCTGCTCGCTCCAACGAAGACGGAAGCATAGAGAAGCTGTATGGACTGTCCCCCACCGGAAAATACTTCGTCAAGAAACAGGACGGTTCTCCCACTTGGGCTTCCTTGTTCCACAAGCTGTCCTACCACCCATACATGGCTCGAGTCTGGCTAAACTGCAAGGAGGCGGTTCTAGACGGAGGAGTGGACATATTTAAGAAAGTGAATGGGCAGAGGATGTACGAGTACGTGGAGAAGGACTTAGAGCTGAAGAACTTGTTTCAGAGGACAATGGCCGAAATATCTGCACTGCACATGGAGAAGATTCTGAAGTGTACCAAGGGTTCGAAGGCATATCTCAGCTTGTGGACGTGGCTGGTGGTATTGGTCAAAGCCTCAAGATGA 678 0.4882 MMSFTQIHQNNGHEDHDEGHARIQALILACGHTYPAAINAASDLDLFDIIAKGSPNNGGALVSVSEIASQLPVLTSKVSISKLDRLLRFLVSFSVLTFSARSNEDGSIEKLYGLSPTGKYFVKKQDGSPTWASLFHKLSYHPYMARVWLNCKEAVLDGGVDIFKKVNGQRMYEYVEKDLELKNLFQRTMAEISALHMEKILKCTKGSKAYLSLWTWLVVLVKASR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5984g00033 225 SUPERFAMILY "Winged helix" DNA-binding domain 20 126 IPR036390 -
Pral5984g00033 225 Pfam Dimerisation domain 38 91 IPR012967 GO:0046983
Pral5984g00033 225 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 225 IPR016461 GO:0008168
Pral5984g00033 225 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 206 IPR029063 -
Pral5984g00033 225 Gene3D - 2 121 IPR036388 -
Pral5984g00033 225 Gene3D Vaccinia Virus protein VP39 128 214 IPR029063 -
Pral5984g00033 225 PANTHER O-METHYLTRANSFERASE 28 206 IPR016461 GO:0008168
Pral5984g00033 225 FunFam Caffeic acid 3-O-methyltransferase 4 121 - -
Pral5984g00033 225 Pfam O-methyltransferase domain 148 205 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5984g00033 Pral-Chr5984 191599 192792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5984g00033 18 213 Monolignol Biosynthesis Gene Families AT5G54160 36.041 8.37e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5984g00033 K13066 K21553 lja:Lj1g3v2994540.1 143.665