Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5984g00027 ATGGAGAAGAAACCTTCTTCAGCAAAAACCATGGCGGTCTTGCCCTACGAAACCCCTAGACTAAGGGACCATTACCTTGTGGGAAAGAAACTTGGGCAAGGCCAATTTGGGACCACGTACCTCTGTACGCACAAGGTGTCAGGTGAACAGTACGCTTGCAAATCGATTCCCAAGCGGAAGCTCTTGTGCAAGGAGGATTACGAAGACGTGTGGAGAGAGATTCAGATCATGCATCATCTGTCGGAGCACCCCAATGTGGTTCGGATACAAGGCACGTATGAGGACGCTGTGTTTGTGCACCTGGTTATGGAGCTTTGTGCTGGGGGTGAGCTGTTTGATAGGATTATTCAAAAGGGGCATTACAGTGAGAGAGAGGCGGTCAAGCTGATAAAGACCATTGTTGGCGTGGTCGAAGCTTGTCACTCTCTTGGGGTCATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATAGTTCTAGTGACGATGCTCAGATGAAGGCTACGGATTTTGGCCTCTCTGTCTTTTACAGGCCAGGACAAACCTTTTCCGATGTAGTTGGAAGCCCCTACTATGTTGCCCCCGAGATTTTGTGCAAGCGTTATGGACCAGAAGCAGATGTATGGAGTGCTGGAGTTATCCTTTACATCTTGCTGAGTGGAGTCCCACCTTTTTGGGCCGAAACTGAACCAGGCATTTTCAGACACATATTACAAGGAAAGCCAGATTTTCAATCTGACCCATGGCCAAGCTTATCAGAAAGTGCTAAAGATTTGGTGAGCAAAATGCTAGAGAAGGATCCTAAGAAAAGAATTTCTGCCCATGAAGTCTTGTGTCACCCTTGGATAAATGATGATAATGTTGCACCTGACAAACCTCTGGATTCCGCGGTTTTGTCCCGTCTGAAACAGTTCTCAGCTATGAATAAAGTGAAGAAGATGGCATTACGGGTGATAGCAGAAAGGCTCTCAGAGGAAGAAATCGGTGGTTTAAAAGAGTTGTTCAAGATGATTGACACAGACAATAGCGGGACTATAACATTTGAGGAACTCAAAGAAGGTCTAAAAAGGGTCGGTTCTGATCTAATGGAATCCGAAATCAAATCCCTAATGGATGCGGCTGACATAGACCAAAGTGGAACAATCGACTATGGTGAATTTCTTGCTGCCACATTGCACATGAATAAGACGGAAAGAGAGGAGAATTTACTTGCAGCATTTTCCTATTTTGACAAAGATGGCAGTGGATACATCACCATTGATGAGCTTCAACAGGCTTGTAAAGAGTTTGGCTTAGGTGACGTGAATCTAGATGTTATGTCAGAGATTGATCTAGACAATGATGGGAGAATTGATTATGGGGAGTTCGTAGCAATGATGAAGCAGGGGGATGGAGGGTTTGGCAGCGGCAGAACTACAAGAGGCAATTTGAACTTCAATATAGCAGATGCCTTCCAAGTAAATGACTCATCTTGA 1476 0.4505 MEKKPSSAKTMAVLPYETPRLRDHYLVGKKLGQGQFGTTYLCTHKVSGEQYACKSIPKRKLLCKEDYEDVWREIQIMHHLSEHPNVVRIQGTYEDAVFVHLVMELCAGGELFDRIIQKGHYSEREAVKLIKTIVGVVEACHSLGVMHRDLKPENFLFDSSSDDAQMKATDFGLSVFYRPGQTFSDVVGSPYYVAPEILCKRYGPEADVWSAGVILYILLSGVPPFWAETEPGIFRHILQGKPDFQSDPWPSLSESAKDLVSKMLEKDPKKRISAHEVLCHPWINDDNVAPDKPLDSAVLSRLKQFSAMNKVKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKEGLKRVGSDLMESEIKSLMDAADIDQSGTIDYGEFLAATLHMNKTEREENLLAAFSYFDKDGSGYITIDELQQACKEFGLGDVNLDVMSEIDLDNDGRIDYGEFVAMMKQGDGGFGSGRTTRGNLNFNIADAFQVNDSS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5984g00027 491 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
Pral5984g00027 491 ProSiteProfiles EF-hand calcium-binding domain profile. 326 361 IPR002048 GO:0005509
Pral5984g00027 491 ProSiteProfiles EF-hand calcium-binding domain profile. 438 466 IPR002048 GO:0005509
Pral5984g00027 491 FunFam Calcium-dependent protein kinase 1 291 464 - -
Pral5984g00027 491 ProSiteProfiles EF-hand calcium-binding domain profile. 362 397 IPR002048 GO:0005509
Pral5984g00027 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pral5984g00027 491 ProSitePatterns EF-hand calcium-binding domain. 375 387 IPR018247 -
Pral5984g00027 491 SUPERFAMILY Protein kinase-like (PK-like) 11 306 IPR011009 -
Pral5984g00027 491 CDD STKc_CAMK 24 282 - -
Pral5984g00027 491 SMART efh_1 330 358 IPR002048 GO:0005509
Pral5984g00027 491 SMART efh_1 435 463 IPR002048 GO:0005509
Pral5984g00027 491 SMART efh_1 402 430 IPR002048 GO:0005509
Pral5984g00027 491 SMART efh_1 366 394 IPR002048 GO:0005509
Pral5984g00027 491 Gene3D Phosphorylase Kinase; domain 1 26 110 - -
Pral5984g00027 491 FunFam CDPK-related kinase 3 17 185 - -
Pral5984g00027 491 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Pral5984g00027 491 Pfam EF-hand domain pair 401 461 IPR002048 GO:0005509
Pral5984g00027 491 Pfam EF-hand domain pair 331 391 IPR002048 GO:0005509
Pral5984g00027 491 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5984g00027 491 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Pral5984g00027 491 ProSitePatterns EF-hand calcium-binding domain. 411 423 IPR018247 -
Pral5984g00027 491 Gene3D - 295 463 - -
Pral5984g00027 491 SUPERFAMILY EF-hand 312 463 IPR011992 -
Pral5984g00027 491 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5984g00027 491 FunFam Calcium-dependent protein kinase 1 27 110 - -
Pral5984g00027 491 ProSitePatterns EF-hand calcium-binding domain. 339 351 IPR018247 -
Pral5984g00027 491 FunFam Calcium-dependent protein kinase SK5 193 288 - -
Pral5984g00027 491 Gene3D Transferase(Phosphotransferase) domain 1 111 294 - -
Pral5984g00027 491 PANTHER SERINE/THREONINE-PROTEIN KINASE 20 456 - -
Pral5984g00027 491 Pfam Protein kinase domain 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5984g00027 491 CDD EFh 403 461 IPR002048 GO:0005509
Pral5984g00027 491 CDD EFh 331 390 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5984g00027 Pral-Chr5984 139234 142706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5984g00027 1 491 EF-hand Containing Proteins AT4G09570 81.911 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral5984g00027 Pkinase 1.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5984g00027 K13412 - zju:107430482 862.448