Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5984g00025 ATGGACGCGCCACCACCTGATCCCAAACGCCGCCCTCCTTTATTGTCTTCCTCTTTCCCCATCACTCTCAAGTTCATGGACGTGACTTACAGGGCCAAGATAGTGAACAAGCATGGAGGCAGAAGCATCAGGCGAATGTTCGCACCTTCGTCCCACCAAGGAACAAACCCCGACACCACCTCGTTACGAGAGCGAACCATTCTCAACGGTATTACCGGTATGGCTTCTCCGGGGCAGATCCTGGCCGTCCTCGGCCCATCGGGCAGCGGAAAATCAACGCTCCTGAATGCAATATCCGGCAGACTCAAAGGAGACGGCCTCGCCGGCACTGTTCTCGCAAATGGCGCTAAACTCAGTAAAACCATTCTTCGGCGAACCGGCTTCGTCAGCCAGGACGACTTGCTCTACCCTCACCTCACCGTCCGGGAGACCTTGGTCTTCTGCTCCCTTCTTCGCCTCCCAACAAGTCTCTCAAAGAAGGAGAAGATGGAGGTGGTGGACTCGGTGATCTCCGAGTTGGGTCTGGGGAAATGCGAGAACACCATCGTAGGCAACAGCTTCGTCCGGGGAGTGTCAGGGGGCGAAAGGAAGCGCGTCAGCATCGCGCGCGAGGTGCTGATGAACCCGAGCCTGTTGATCCTGGACGAACCAACTTCGGGTCTCGACTCAACGGCGGCGCAGCGGGTGGTGAAAACTCTGAGGTCGCTGGCGCAGAAGGGGAAGACAGTGGTGACGTCGGTGCACCAGCCGTCAAGCCAGGCGTACCAAGAGTTCGATGCGGTGCTGCTGCTGTCGGACGGGAAGTGCCTGTACTTCGGGAAAGGCAGCGACGCCATGAGCTACTTTGAGTCAATCGGATTGACGCCGTCTTTCCCAGTGAACCCCGCCGATTTTCTGCTTGATCTCGCTAACGATGTTTGTCAAGTCAATGGTATAGGTGAAAGAGATAGGCCAAACATAAAACAGAACCTTGTTCGTTCATACCACACCACACTGGCTCCCAAGGTCAAAGCTGCTTGCAAGGACAGTTCTGCAAAGAACACTAACCACTTGATCAAAAACAGGTGCTCTTCTGAAGAACGTGGCTATGGCCATCGTAGTAATACTAGAGACAAGATCAGCTTCTCAAATTGGTTCAACCAATTCAGCATTCTGCTCCACAGAAGCCTCAAAGAAAGAAGGCACGAATCCTTCAACACTCTCAGAGTCTCCCAAGTGGTCGCTTCTGCATTATTGGCCGGCTCACTCTGGTGGCACTCTCACTATACCAACATCCAAGACAGGCTTGGCCTTCTCTTCTTCATCTCCATCTTCTGGGGCGTCTTCCCAGCTTTCAACTCAGTCTTCGCTTTCCCTCAAGAGCGCCCCATCGTCACCAAAGAGCGAGCCTCTGGTATGTACACCTTGTCTTCCTATTTCACGGCCCGAATTGTAGGAGACCTGCCCATGGAGCTCCTTCTTCCCACAGTTTTCCTCATTGTGACTTACTGGATGTGTGGGTTAGAGACGGATCTGTGGGCTTTCTTGCTGACATTGCTGGTACTTCTGGGACACGTTCTTGTGTGCCAGGGACTTGGGCTGGCTTTAGGTGCGGCAATAATGGATGCAAAGCAGGCTTCCACTGCAGCAGCAGTGACGATGCTGGCTTTTGTGATAACAGGAGGGTACTATGTGCACAAAGTGCCATCTTGCATGGGTTGGATTAAGTATACATCCACAATCTTTTACTGTTATAGGCTTCTGATAAGTGTGCAGTATGGGGATGGCAATAGAATCTCACATCTTCTAGGTTGCTCTCATCCTCATAGGCAAACTGCTGGGGCTGGCTGCAAATTTGTTGAGGACGACGTGGTGGGCCAAATCAGCCCTTTGGGAAGCACTGCGGCTATGTTGCTTATGCTTGTTGTTTATAGATTATTAGCTTACCTTGCATTGAAGCGTATCAAGGGTTGA 1953 0.5238 MDAPPPDPKRRPPLLSSSFPITLKFMDVTYRAKIVNKHGGRSIRRMFAPSSHQGTNPDTTSLRERTILNGITGMASPGQILAVLGPSGSGKSTLLNAISGRLKGDGLAGTVLANGAKLSKTILRRTGFVSQDDLLYPHLTVRETLVFCSLLRLPTSLSKKEKMEVVDSVISELGLGKCENTIVGNSFVRGVSGGERKRVSIAREVLMNPSLLILDEPTSGLDSTAAQRVVKTLRSLAQKGKTVVTSVHQPSSQAYQEFDAVLLLSDGKCLYFGKGSDAMSYFESIGLTPSFPVNPADFLLDLANDVCQVNGIGERDRPNIKQNLVRSYHTTLAPKVKAACKDSSAKNTNHLIKNRCSSEERGYGHRSNTRDKISFSNWFNQFSILLHRSLKERRHESFNTLRVSQVVASALLAGSLWWHSHYTNIQDRLGLLFFISIFWGVFPAFNSVFAFPQERPIVTKERASGMYTLSSYFTARIVGDLPMELLLPTVFLIVTYWMCGLETDLWAFLLTLLVLLGHVLVCQGLGLALGAAIMDAKQASTAAAVTMLAFVITGGYYVHKVPSCMGWIKYTSTIFYCYRLLISVQYGDGNRISHLLGCSHPHRQTAGAGCKFVEDDVVGQISPLGSTAAMLLMLVVYRLLAYLALKRIKG 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5984g00025 650 CDD ABCG_EPDR 65 273 - -
Pral5984g00025 650 ProSitePatterns ABC transporters family signature. 191 205 IPR017871 GO:0005524|GO:0016887
Pral5984g00025 650 Gene3D - 59 285 IPR027417 -
Pral5984g00025 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 642 - -
Pral5984g00025 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 284 IPR027417 -
Pral5984g00025 650 SMART AAA_5 77 268 IPR003593 GO:0016887
Pral5984g00025 650 Pfam ABC transporter 69 219 IPR003439 GO:0005524
Pral5984g00025 650 Pfam ABC-2 type transporter 381 586 IPR013525 GO:0016020|GO:0140359
Pral5984g00025 650 Pfam ABC-2 type transporter 248 347 IPR043926 GO:0140359
Pral5984g00025 650 FunFam ABC transporter G family member 22 55 285 - -
Pral5984g00025 650 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 291 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5984g00025 Pral-Chr5984 118014 123675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5984g00025 67 284 Calmodulin-binding Proteins AT2G36910 30.631 5.61e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5984g00025 K05681 - qsa:O6P43_004081 866.3