Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5984g00017 ATGGGTTCAGAGACGTTCTTAGAAGTTATCTTAGCAATATTGCTTCCACCTGTTGGAGTCTTCCTCAGATATGGCTGTGGAGTGGAGTTCTGGATATGCCTGTTGCTGACAATTTTGGGATATATACCTGGCATTATATATGCCATTTATGTCCTCGTTGGATGA 165 0.4182 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5984g00017 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016020
Pral5984g00017 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 2 53 IPR000612 GO:0016020
Pral5984g00017 54 Pfam Proteolipid membrane potential modulator 6 53 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5984g00017 Pral-Chr5984 78512 79314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5984g00017 1 54 RCI2 Gene Family AT2G38905 98.148 1.60e-31 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5984g00017 - - crb:111830941 112.464