Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5983g00001 ATGGTGCAGGTTCTTCGGGAGAAGTACAGTTGCAAGGCATCATCAAAGTGCAAAAGCAGAAGTGAGAGGATTCTTCTGAGAGAAAGTGAAAGCAAAGGGATTCTATTAAACAGCTATGCAATTGTGAGCCATTATGGCACTGATAACTTCACCTCCATTGGAGAAGCCATTTCTGCTGCACCTACAAACCTCAGACCAGAAGATGGCTACTTCCTTATCTATGTCAGAGAAGGATACTATGAAGAATATGTCATTGTTCCTAAACACAAGAAGAACATCTTGCTCATTGGTGATGGTATCAACCACACCATCATCGCAGGCAATCACAGTGTCATTGATGGCTGGACAACCTTTAATTCTTCCACCTTTGCTGTTTCTGGGGAAAGATTCATAGCAGTGGACATCACATTCAGGAACACAGCAGGTCCAGCGAAGCACCAGGCAGTAGCAGTGAGGAACAATGCTGATCTCTCCACCTTTTATCGATGCAGCTTCGAAGGATACCAAGATACCCTCTATGCTCACTCCCTGAGGCAATTCTACAGAGAATGTGAAATTTATGGTACAGTTGACTTCATATTTGGCAATGCAGCTGTTGTATTCCAAAGCTGCAAAATCTATGCCAGGAAGCCACTTCCATTCCAGAAGAATTCCATCACAGCACAAGGCAGAACCGACCCGAACCAGAACACCGGAATCTCAATCCAGAATTGCAGCATTGAAGCAGCACAGGATTTGGCTTCAGATTTGAACTCTACTAATACTACTACTACCACCACCTTGACATACTTGGGAAGGCCATGGAAGTTATATTCTAGAACGGTGTACATGGAGTCTTATATTGGGGATGTGATTGAACCTTCTGGTTGGTTAGAGTGGAATGGGACTGTAGGGTTGGACACTTTGTTTTTTGGCGAGTTCAATAACTATGGACCTAGGGCTAGTACAAACAATAGGGTTCAATGGCCTGGTTTTAACCTTCTGAATGCTACTCAGGCTTTGAACTTTACTGTCCTGAATTTTACACTTGGAGATACATGGCTTCCGGACACAGATATACCATACTCTGCAGGATTACTAGGAAATTAG 1089 0.4353 MVQVLREKYSCKASSKCKSRSERILLRESESKGILLNSYAIVSHYGTDNFTSIGEAISAAPTNLRPEDGYFLIYVREGYYEEYVIVPKHKKNILLIGDGINHTIIAGNHSVIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPAKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECEIYGTVDFIFGNAAVVFQSCKIYARKPLPFQKNSITAQGRTDPNQNTGISIQNCSIEAAQDLASDLNSTNTTTTTTLTYLGRPWKLYSRTVYMESYIGDVIEPSGWLEWNGTVGLDTLFFGEFNNYGPRASTNNRVQWPGFNLLNATQALNFTVLNFTLGDTWLPDTDIPYSAGLLGN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5983g00001 362 Pfam Pectinesterase 40 344 IPR000070 GO:0030599|GO:0042545
Pral5983g00001 362 SUPERFAMILY Pectin lyase-like 38 358 IPR011050 -
Pral5983g00001 362 ProSitePatterns Pectinesterase signature 2. 186 195 IPR033131 -
Pral5983g00001 362 Gene3D - 38 361 IPR012334 -
Pral5983g00001 362 PANTHER PECTINESTERASE 38 349 - -
Pral5983g00001 362 FunFam Pectinesterase 35 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5983g00001 Pral-Chr5983 2219 4386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5983g00001 1 360 Carbohydrate Esterase AT3G10720 64.543 2.27e-180 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5983g00001 K01051 - gmx:100816503 592.808