Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral597g00004 ATGATTTTGTCCGATGAAAAGGGTGATAGGATTGAAGCTTCCATTGCTCATAAAGGACATATACAAAGATATGTCAAAGATTTAGTAGAGGGTGGGGTTTATCAATTTGAGAACTTCGAAGTCGTGGACAATGATGATGACAATTACAAAACTTGTGACCATCCTTGCAAAATTATGTTCCATGCAATGACATTTTTTCAAGAGCATGATTTGCCAATCCCCCTGTATGCATTTAACTTTGTTCCAATCAAGGACATTGCCAACAACAATGCCAAAAACAATAAATTAGTTGATATTATTGGATTTCTACAAGCATTTGGGAACTTGGTTGATCATAAAAATGATTTTGGAACAACGAAGAAATTGGCTCTCACTATTGCTGATCAAAATGAAATCCAAGTAAATGTATCTCTTTTTGGGGAGGTCGCAAAAAAGGCGTTTGAGGCGAGGACAGATGATTTAGAAGTCCCCACTATAGTTGTCATACGGTTTGCTAAGATTGCAAGGAAAAAAAGTTATGGACACATATCTAATGCCTTTTATGTGACAAGAGTTTATTTCAATCCAGATTTTCCAGAGGTCAGGAGTTTTATTGACAGCCTCAATGTTATGCCTGGAGCAAGTCAGGCTTTCTCACAGATCTCTTCTACTGTAGTGCCCGAGATTACCAGTGACTCTCTCTTAACTTTCCCTACTAGAATTCCATTGGGTGAAATTTCCATATTAACAGAGGCATCAGAAGTTGTTACCAAAGTAACCATCCAAAAAGTTGAGACATCTTACGGTTGGTACTATGATGGATGTCCATGCGATAAAAAGCCAGCATATGAGGGTGACAAATTGAAATGCAATTCTTGTCATAGGGAAGTACTAATGACTGAACCCAAATTCAAGCTTCATTACACAGTTTTTGATTCTACTGCAAAGTGTTCCATACTGTTCTTCAACCGTCATGCATCCGAACTCATACATTGTTCAGCGGTTGATCTTAGGAAGGCAGTAGTCAAGAGTTCACCATTGGAGTCATCTGCGTCTGGATCATGTGAAAAAATGACGAGCAATGATAGATCTGTTGAAAATGATGATATTAACACATCTCAGTTGATGACTTCTACAACAAATTTGACAAAGTGGTAG 1137 0.3782 MILSDEKGDRIEASIAHKGHIQRYVKDLVEGGVYQFENFEVVDNDDDNYKTCDHPCKIMFHAMTFFQEHDLPIPLYAFNFVPIKDIANNNAKNNKLVDIIGFLQAFGNLVDHKNDFGTTKKLALTIADQNEIQVNVSLFGEVAKKAFEARTDDLEVPTIVVIRFAKIARKKSYGHISNAFYVTRVYFNPDFPEVRSFIDSLNVMPGASQAFSQISSTVVPEITSDSLLTFPTRIPLGEISILTEASEVVTKVTIQKVETSYGWYYDGCPCDKKPAYEGDKLKCNSCHREVLMTEPKFKLHYTVFDSTAKCSILFFNRHASELIHCSAVDLRKAVVKSSPLESSASGSCEKMTSNDRSVENDDINTSQLMTSTTNLTKW 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral597g00004 378 SUPERFAMILY Nucleic acid-binding proteins 248 333 IPR012340 -
Pral597g00004 378 Gene3D - 233 369 IPR012340 -
Pral597g00004 378 Gene3D - 1 70 IPR012340 -
Pral597g00004 378 Pfam Replication factor-A C terminal domain 250 333 IPR013955 -
Pral597g00004 378 MobiDBLite consensus disorder prediction 341 378 - -
Pral597g00004 378 CDD RPA1_DBD_A_like 1 64 - -
Pral597g00004 378 Gene3D - 72 206 IPR012340 -
Pral597g00004 378 CDD RPA1_DBD_B_like 98 201 - -
Pral597g00004 378 SUPERFAMILY Nucleic acid-binding proteins 78 202 IPR012340 -
Pral597g00004 378 Pfam Replication protein A OB domain 89 167 IPR031657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral597g00004 Pral-Chr597 20886 23099 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral597g00004 68 330 Core DNA Replication Machinery Family AT2G06510 25.540 2.54e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral597g00004 - - pcin:129301944 233.417