Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5977g00001 ATGGCGAAAGCAGCCCCCACGAAGGTCCTTGAAGTTTGCAGGGTGGCACCACGACTCGAAGGAACCGCTTCCGCCGCCGCATCGGAAACATCTCTACCACTTACCTTTTTCGACATGCTGTGGCTGCGCTTCCCGCCCGTCGAGCGTCTTTTCTTCTACGAATTCCCCAACCCACCAGCCTCCTTCTTCCATTCCCTTCTTCCAAAACTCAAACATTCACTCTCTCTCACTCTCCATCACTTCTTTCCTCTCGCCGGCAACATCATATGGCCGCCTCATTCCCCAAAACCCTTCATCCATTGTGTCTCCGGCGACGGCGTCTCACTTACCGTTGCTGAATCGAACGCAGATTTCAACGTCCTCTCAAGTTCCGATTACTCCGAAACCCAAGAAAGCATCCTGCTTGTACCCCACTTGGCTGTTTCCGATGAGAAAGCCTCTCTCATGAGTCTGCAAATCACTCTGTTTCCGAACTCTGGCTTCTCTGTTGGAATAACCGCGCACCATGCAGCCATGGATGGAAAATCTTCAACTTTATTTCTGAAAGCATGGGCTTATATCTGCTCTGAACTCGATGAATCCTCTTCATGTTCATCGCTACCCGAGAATCTAATTCCATTGTTTGATAGGTCAGTAGTCAAAGAGCCATCTGGGGCTGCAGAGGTATTTTCGAATCACTGGTTAAAGGAAGGTGGACCAAATAACAGAAGCTTGATGTTGTGGGACATGAAGAAGACAGATCAAGTCAAGCGAATAAGGGGTACATTTCAATTGGTTCCATCAAACATTCAAAAGCTTAAGCAGATAGCAGAGTCCAAGCTGAACAAGAAGGTTCATGTATCGACCTTTTCAGTAACATGCGCTTATGTGTTGGACTGCTTAGTCAAATCAGAACAAACAAAACAAGACAAGTTGTTGTTCGCATTCACTGCGGACTGTAGATCTCGTTTGAATTCTCCGATTCCGCCCACATATTTTGGAAGCTGCGTGGGGGCTGTTAAAGCTGTGGCTGAAACAAAGAGCTTGCTAGGGAACGATGGGTTCATTGCCGCTCTTGAGGCCATAAGTGATGGTTTGAAGAGATTTGAAGATGAAGGATTAGGTGAAGCAGAAAGATGGATATCTGATATGGTAAGTCTTATGGAAACTCATAGATTTTGTTCAACTGCAGGGTCACCAAGGTTTGAGGTCTACGGTATTGATTTTGGGTGGGGAAGACCCAAGAAGGTGGATATAGTTTCTATAGGCGAGACGGGAGCCTTTTCTCTTTCTGAAAGCAAGAATGGCAATCATAATGGAGGTATTGAGATTGGGTTGGTGTTGAACAGTCCAGAAATGGAGGCTTTTTCTGCTCTTTTTCACGAAGGTCTTTCTTCCTCTTCATGA 1386 0.4632 MAKAAPTKVLEVCRVAPRLEGTASAAASETSLPLTFFDMLWLRFPPVERLFFYEFPNPPASFFHSLLPKLKHSLSLTLHHFFPLAGNIIWPPHSPKPFIHCVSGDGVSLTVAESNADFNVLSSSDYSETQESILLVPHLAVSDEKASLMSLQITLFPNSGFSVGITAHHAAMDGKSSTLFLKAWAYICSELDESSSCSSLPENLIPLFDRSVVKEPSGAAEVFSNHWLKEGGPNNRSLMLWDMKKTDQVKRIRGTFQLVPSNIQKLKQIAESKLNKKVHVSTFSVTCAYVLDCLVKSEQTKQDKLLFAFTADCRSRLNSPIPPTYFGSCVGAVKAVAETKSLLGNDGFIAALEAISDGLKRFEDEGLGEAERWISDMVSLMETHRFCSTAGSPRFEVYGIDFGWGRPKKVDIVSIGETGAFSLSESKNGNHNGGIEIGLVLNSPEMEAFSALFHEGLSSSS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5977g00001 461 Gene3D - 249 460 IPR023213 -
Pral5977g00001 461 Pfam Transferase family 24 451 - -
Pral5977g00001 461 Gene3D - 7 236 IPR023213 -
Pral5977g00001 461 SUPERFAMILY CoA-dependent acyltransferases 104 211 - -
Pral5977g00001 461 PANTHER - 7 459 - -
Pral5977g00001 461 SUPERFAMILY CoA-dependent acyltransferases 276 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5977g00001 Pral-Chr5977 18205 19836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5977g00001 50 455 Monolignol Biosynthesis Gene Families AT5G48930 25.837 2.96e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5977g00001 - - vra:106767538 486.878