Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5976g00002 ATGGCGTCTCAAAATCCTAATAGCTCTCTGAAAATACACGAGCTCTGTAGAATAGCTCCGCCACCATCTTCACCAAAATCCTCTTTCTCTCTCACCTTCTTCGACTTGCTTTGGCTCAGATTTCATCCTGTCGAGCGTCTCTTCTTCTTCTCGGTTCCTCACTTAAACCCTTCTTCCTTCTTCGATTCCATCGTTCCAAAGCTCAAACGCTCCCTCTCTCTCACTCTGCAACACTTTCTTCCTCTCGCCGGTAGCATCGTTTGGCCCTCCGACTCGCCCAAACCCATCGTTCAATACACTCCTGGAGATGCCGTCTCTCTCACCATAGTTGTTTCTGATTCTGATTTCAACCATGTCTTAAACAAATCCCCTCGTGACGCCTCGCAATCTCGTGCTTTTGTTCCCATGTTGGATTCTTCTGATACATTTGCTTCGGCTATTTCTCTGCAAATCACTCTGTTTCCCAACGATGGATTTTGCATAGGAATCAGCGTACACCATGCTTGTTCAGATGGGAAATCATCGTCTATGTTCATGAAGGCCTGGGCTTATCTCTGTCGAACAGAAGCAGAGAACGAATCTTCTGGTTTGCTCCCTCAAGAACTACAACCATCCTTAGACAGGGAAGTTATAGTCGATCCATGTGGCATTGAAGGTGCATACATCAAAGGGTGGTCAGGTTTAGATCCAACTCAGAAGAAGCCAAGCTTGAAGATTTTGTCCGACATGTTCTCTCCGAAAGTGGAAGACTCAGCTCGAGCCACGTTCGAGCTCAAGCGTGGAGATTTAGACAAGATAAAGGAAAGGGTATTGCAGAAATGGGAAAATCACAAGGAGAAAGATGAAGGAGAAGATTCATCATTTTCAAAGCCTCAAACTTTATCAACCTTTGTGCTTACAGCTGCTTACGTATGGATCTGCTTCGCAAAAGCTAAGGAAAGGACCGAACAAAAGAAAACTAAAGTGTTCCTGGGTTTCGTAGTGGATTGCAGAACCAGGTTAGATCCTCCAATCTCTGAAAACTACTTCGGCAATTGTGTGATGTCTCATATGATAGAAACACAACCAGAAGACTTGACAGAAGATGGGGTTGTCATCGCTGCTAAGAAGATACACAGAAAGATAAGGAAAATACAGAAAGAGAAAGGAGCGCTTGATGGAGCAGAGACGTTGTTTTCTAAGTTTTCTGATTTGCTAACTGAAGAGAACCAACTTGCCGTTATAGGAGTAGCCGGGTCGACCCGATTCGGGGTTTATCAGGCGGACTTTGGGTGGGGAAGGCCTGAGAAAGTGGAGATAACTTCTGTGGATCGAGGTACGACAATGGCGATGGCAGAGAGTAAAGACGGAAATGGAGGGGTTGAAGTGGGACTGGTACTGAAGAATCAAGTGATGCATCAATTTGCTTCACTGTTTCGAACTGAGATAGAGTCTTTACAATAA 1443 0.4498 MASQNPNSSLKIHELCRIAPPPSSPKSSFSLTFFDLLWLRFHPVERLFFFSVPHLNPSSFFDSIVPKLKRSLSLTLQHFLPLAGSIVWPSDSPKPIVQYTPGDAVSLTIVVSDSDFNHVLNKSPRDASQSRAFVPMLDSSDTFASAISLQITLFPNDGFCIGISVHHACSDGKSSSMFMKAWAYLCRTEAENESSGLLPQELQPSLDREVIVDPCGIEGAYIKGWSGLDPTQKKPSLKILSDMFSPKVEDSARATFELKRGDLDKIKERVLQKWENHKEKDEGEDSSFSKPQTLSTFVLTAAYVWICFAKAKERTEQKKTKVFLGFVVDCRTRLDPPISENYFGNCVMSHMIETQPEDLTEDGVVIAAKKIHRKIRKIQKEKGALDGAETLFSKFSDLLTEENQLAVIGVAGSTRFGVYQADFGWGRPEKVEITSVDRGTTMAMAESKDGNGGVEVGLVLKNQVMHQFASLFRTEIESLQ 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5976g00002 480 Pfam Transferase family 16 470 - -
Pral5976g00002 480 Gene3D - 247 480 IPR023213 -
Pral5976g00002 480 PANTHER - 10 477 - -
Pral5976g00002 480 SUPERFAMILY CoA-dependent acyltransferases 288 477 - -
Pral5976g00002 480 Gene3D - 6 228 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5976g00002 Pral-Chr5976 25654 27450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5976g00002 10 468 Monolignol Biosynthesis Gene Families AT5G48930 24.632 1.75e-26 109